Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00953 ATGGAAGCTACTAGATGTTGGTTTAAGAAGTTCAAATCCAAAGACAATCCAAAGCCCCCTACAAATAAGGAGAGTACAGGCAATGCAAGAGATGCATCGAGACCACCAACCAGTGAAGAGGTACCCTCCAATGTCACCAAGCAGAAGGTTGCAGCTGCCAAACAGTATATAGAAAACCACTACAAGAAGCAAATGAAGAGCTTGGAAGAAAGGAGGGAGAGACGCCATGTACTAGAAAAGAAGTTGGCTGATGCTGAGGTCTCTCAAGAAGAGCAAAGCAACCTGCTTAAGCATCTAGAGAAGAAGGAAACAGAGTATATGCGTCTTCAGAGGCATAAAATGGGTGCTGATGATTTTGAGCCACTAACAATGATAGGGAGGGGTGCTTTTGGAGAGGTTAGAGTTTGTCGGGAGAAAGCAACTGGCCATGTATATGCCATGAAGAAGCTTAAGAAATCAGAGATGCTTCGAAGAGGCCAGGTTGAGCATGTGAAAGCTGAAAGGAATCTATTGGCGGAGGTTGACAGTAATTGTATTGTAAAGTTGTACTGCTCTTTCCAAGATGAAGAGTATTTATATCTTATTATGGAATACTTACCTGGTGGGGATATGATGACTTTGTTGATGAGGAAAGATACTCTTACAGAAGATGAGGCTCGATTTTATGTTGGTGAAACAGTTTTAGCTATCGAGTCAATCCATAAACATAATTATATCCACAGAGATATCAAGCCTGATAACTTGCTTCTTGACAAGGATGGCCATATGAAATTATCAGATTTTGGATTATGTAAACCATTAGATTGTAGTAACCTCCAAGAAAAGGATTTTTCCCAGGGAAGTAACCTTAGTGGTGCTCTTCAAGGTGATGGGCGTCCTGTGGCATCAAAACGCACACAGCAGGAACAACTACAGCATTGGCAAAGGAACAGGCGGATGCTTGCTTATTCTACAGTTGGAACGCCTGATTATATTGCTCCGGAAGTTCTGCTGAAGAAAGGATATGGAATGGAATGCGATTGGTGGTCACTTGGTGCCATCATGTATGAAATGCTTGTGGGTTTTCCACCGTTTTACTCAGATGAGCCTATGTCAACTTGTAGGAAGATAGTTAATTGGAAAACTCATTTGAAATTTCCAGAAGAAGCGAAACTCTCTCCAGAAGCGAAGGATCTAATTAGTAAACTCTTATGCAATGTTGAACAAAGGCTTGGGACCAAGGGTGCAGATGAAATAAAGGCACACCCATGGTTCAAGGGCATTGAATGGGACAAGTTGTATCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAACTGGATACTCAAAATTTTGAGAAGTTTGAAGAGACTGAAAACTCAATTCAGACGTCATCGAAATCAGGTCCATGGAGAAAGATGCTGTCATCGAAAGATATTAACTTTGTGGGTTATACGTACAAGAACTTCGAAATCATCGATGATAATCAATTGCCTGGAATCGCTGAATTGAAGAAGAAGAGCACAAAATCTAAAAGACCTTCCATCAAATCTCTTTTCGAAAACGAATCTGCAATGGCGACCAATCAACAACCTGTTCAAGGCAGCTTTTTGAAACTCTTGCCTCCCCAACTAGAAGTTCCTGAGAAACCGATGAGCGCCAATGGGAAGCATTCATGA 1662 41.34 MEATRCWFKKFKSKDNPKPPTNKESTGNARDASRPPTSEEVPSNVTKQKVAAAKQYIENHYKKQMKSLEERRERRHVLEKKLADAEVSQEEQSNLLKHLEKKETEYMRLQRHKMGADDFEPLTMIGRGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDKDGHMKLSDFGLCKPLDCSNLQEKDFSQGSNLSGALQGDGRPVASKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGFPPFYSDEPMSTCRKIVNWKTHLKFPEEAKLSPEAKDLISKLLCNVEQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEETENSIQTSSKSGPWRKMLSSKDINFVGYTYKNFEIIDDNQLPGIAELKKKSTKSKRPSIKSLFENESAMATNQQPVQGSFLKLLPPQLEVPEKPMSANGKHS 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6369726 6375305 - Carg10970-RA Car08g00953 153527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00953 553 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Car08g00953 553 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 520 - -
Car08g00953 553 Gene3D Transferase(Phosphotransferase) domain 1 205 435 - -
Car08g00953 553 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 520 - -
Car08g00953 553 MobiDBLite consensus disorder prediction 1 48 - -
Car08g00953 553 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00953 553 SUPERFAMILY Protein kinase-like (PK-like) 94 471 IPR011009 -
Car08g00953 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Car08g00953 553 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00953 553 Coils Coil 68 102 - -
Car08g00953 553 CDD STKc_NDR_like 117 482 - -
Car08g00953 553 Gene3D Phosphorylase Kinase; domain 1 108 204 - -
Car08g00953 553 MobiDBLite consensus disorder prediction 20 48 - -
Car08g00953 553 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car08g00953 553 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00953 553 MobiDBLite consensus disorder prediction 1 19 - -
Car08g00953 553 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Car08g00953 553 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00953 Car17g00140 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01334 Car-Chr1:11873160 Car08g00953 Car-Chr8:6369726 0 dispersed
Car02g00760 Car-Chr2:5550539 Car08g00953 Car-Chr8:6369726 9.15E-86 dispersed
Car03g01325 Car-Chr3:10060765 Car08g00953 Car-Chr8:6369726 0 dispersed
Car05g00155 Car-Chr5:804397 Car08g00953 Car-Chr8:6369726 0 dispersed
Car08g00953 Car-Chr8:6369726 Car17g01230 Car-Chr17:9367910 0 dispersed
Car15g01249 Car-Chr15:9748482 Car08g00953 Car-Chr8:6369726 2.86E-87 dispersed
Car17g00140 Car-Chr17:866008 Car08g00953 Car-Chr8:6369726 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89062 PF00069 Pkinase 7.10E-66 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00953 K08790 - csv:101205120 1076.23