Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00985 ATGCCAACGGGCGTGCGCGTGGCGGGGCTTATGCGCGCACCGGCCCCAACAATCAGCGCCGCTTCTTCCCTCTTCCTCTTCCTCTACCTCTTCCTCTACCTCTCCTCCTCGTCGTTAGTGCTCGTCTTGTCTGCCCCATCCGACACCGAAACTCTGCTTGAATTCAAGCGCTCTTTGACCTCGGCCAGGGCTCTTAGAGATTGGAACCCCAAGGTCCCTCCTTGCAACAACAACAAGCCCAATTGGGCGGGCGTGCTGTGTTTGAATGGCCATGTTAGAGGGCTGCGGCTTGAGAATATGGGGCTTAAGGGGGAGGTTAATGTGGATCCCTTGGTTTCTTTGTCTCGTATGCGCACCCTGAGCTTCATGAACAATACCTTGGTTGGGCCTTGGCCTTCTGTTATTGGCAAACTACGCAATCTACGCTCCGTTTATCTTTCCTATAACCATTTTTCGGGTGCAATCCCGGACGATGCCTTCACGGGTATGAAATTTTTGAAGAAAGTGTTTTTGACCAATAATGAATTCAACGGCCAAATTCCCTCATCTCTCGCTTCCCTGTCTAGGCTTATGGAATTGAGACTTGATGGAAACAAATTCAGAGGCCAAGTCCCCCAATGCGAGAGAGCCCTAATTTCATCCGCAGGGCTACTCAAAATCGCAGTGATAGTCATAATTTTGGGGGTAACATTAGCAGTAATAGCTGCAATTTTCATCATAATGAATTTAAGGAGGCAGCCCGCCTTGCAATTAGGGAAGGGGAATCCCGGCGTTATAGAAGAGGATCAGAACAAATACATGAGTTCTAAGCCAACCACGGCGGTGGTTGGCGATGGATACAGATCGACGGAGTCGTCCGTAGCGCAGGCTAAAAGAGGTGCAGAACATGGGAAGCTATTATTTGTGAGAGACGACAGGGAGAAATTCGACTTACAAGACCTCCTCAGAGCATCCGCCGAAATCCTGGGCAGTGGCTCATTCGGCTCTTCCTACAAAGCAACAATACTCTGTAACGCCGTGGTTGTTAAGCGATACAAGCATATGAACAACGTAGGGAGAGAAGAGTTTCATGAACACATGAGACGCCTCGGCCGGTTGACGCATCCAAATCTACTCCCCTTGGTTGCTTATTACTACAGAAAAGAAGAGAAGCTCTTGATTTCGGATTTTGTAGATGAAGGGAGTTTGGCGAGCCATCTGCACGGCAACCACAACCTGGAGGAGCCAGGGATTGATTGGGCTACAAGATTGAAGATAATCAGAGGCATAGCAAGAGGAATGTCGTACCTCTACACATCGCTGCCAAGCATAGCAGCACCACACGGACATCTGAAATCATCAAATGTGCTGCTAGACGAGTCGTTAGAGCCGCTGCTTACGGATTACGGGCTAATCCCTGTGGCTAATGTAGAGCATGGACAGACATTAATGATGGCTTACAAATCACCCGAATACGCTCATCTCGGCCGTATAAGCAAGAAAACTGACGTATGGAGCTTCGGAATTCTGATACTGGAAATGCTAACAGGTAGGTTCCCAGAGAACTACTTGACACGAAATCACGACACGAAATCAGACCTAGCCACTTGGGTAAACAACATGATCAAGGAAAAGAAAACGTCGCTAGTGTTCGACGCAGAGCTAGGGCGAGCTAGGGAGAGCAACAAAGGCGAGCTGCTGAAGATGCTGAAGATTGCGTTGAGTTGCTGCGAGGAAGACGTGGAGAGAAGGCTGGACTTGAATCAGGTAGTGGCCCAAATTGAAGATCTGAACGACGCTGATTTGAGCGATAACGATGGAGATAACTTCGCTTCCACATCTCGCAACTCTCAAATGCCTGTTTGA 1845 49.0 MPTGVRVAGLMRAPAPTISAASSLFLFLYLFLYLSSSSLVLVLSAPSDTETLLEFKRSLTSARALRDWNPKVPPCNNNKPNWAGVLCLNGHVRGLRLENMGLKGEVNVDPLVSLSRMRTLSFMNNTLVGPWPSVIGKLRNLRSVYLSYNHFSGAIPDDAFTGMKFLKKVFLTNNEFNGQIPSSLASLSRLMELRLDGNKFRGQVPQCERALISSAGLLKIAVIVIILGVTLAVIAAIFIIMNLRRQPALQLGKGNPGVIEEDQNKYMSSKPTTAVVGDGYRSTESSVAQAKRGAEHGKLLFVRDDREKFDLQDLLRASAEILGSGSFGSSYKATILCNAVVVKRYKHMNNVGREEFHEHMRRLGRLTHPNLLPLVAYYYRKEEKLLISDFVDEGSLASHLHGNHNLEEPGIDWATRLKIIRGIARGMSYLYTSLPSIAAPHGHLKSSNVLLDESLEPLLTDYGLIPVANVEHGQTLMMAYKSPEYAHLGRISKKTDVWSFGILILEMLTGRFPENYLTRNHDTKSDLATWVNNMIKEKKTSLVFDAELGRARESNKGELLKMLKIALSCCEEDVERRLDLNQVVAQIEDLNDADLSDNDGDNFASTSRNSQMPV 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6610544 6612786 - Carg15863-RA Car08g00985 153559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00985 614 Pfam Leucine rich repeat 139 200 IPR001611 GO:0005515
Car08g00985 614 ProSiteProfiles Protein kinase domain profile. 316 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g00985 614 Pfam Leucine rich repeat N-terminal domain 46 87 IPR013210 -
Car08g00985 614 MobiDBLite consensus disorder prediction 598 614 - -
Car08g00985 614 MobiDBLite consensus disorder prediction 595 614 - -
Car08g00985 614 Pfam Protein tyrosine and serine/threonine kinase 320 586 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00985 Car-Chr8:6610544 Car11g00304 Car-Chr11:1662825 0 dispersed
Car08g00985 Car-Chr8:6610544 Car01g00001 Car-Chr1:9182 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89063 PF07714 PK_Tyr_Ser-Thr 1.80E-30 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00985 - - csv:101203276 759.599