Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g00995 ATGGCTCGGGACGGGCATGTGGTGCCGGTGGATCCACAGACGGCGTTGACTGTTAAGAAGAAGAAACAGTCTTCTCGGAGTTGGATTCTGCTGGATTGTTCGGGCCAAGGGACCGTCCTCGATGTCGACAAGTATGCGATTATGCATCGAGTTCAAATTCATGCTCGAGATCTTCGGATTCTTGACCCTTTGCTTTCTTATCCCTCTAAGATTTTGGGGCGTGAGAGGGCCATTGTTCTTAATCTGGAGCATATAAAGGCGATCATTACTGCTGAAGAGGTTTTGCTTAGAGATCCAACAGATGAACATGTCATCCCTGTGGTCGAAGAGCTTCAGAGACGACTGCCTCCTTCTAATGTCTTCCAAGAGTATCAGGGTGGGCTACATGATGGCGAAGCTGAAGAAGATGAATCCCCATTTGAATTCCGTGCCCTCGAGGTAGCTTTGGAAGCTATATGTAGTTTTCTTGCCGCTCGGACAACTGAACTGGAGACTGCTGCTTATCCAGCATTGGATGAGCTTACTACCAAGATTAGTAGCCGCAATTTGGACAGAGTTCGTAAATTGAAGAGTGCAATGACTAGGTTGACCGCAAGGGTTCAAAAGGTGAGAGATGAGCTTGAACAATTACTAGACGATGACGATGATATGGCAGACCTTTACTTGTCAAGAAAGACGAGTTCCTCTTCTCCTGTAAGTGGTTCTGGTCCTGCCAATTGGTTTCCTGCATCTCCTACCATTGGTTCAAAGATCTCAAGAGCAAGCAGAGCAAGTATAGCAACTGCACGAGGGGACGAAGATGACATCGAGGAGCTTGAAATGTTACTGGAGGCCTACTTTATGCAGATTGATGGTACATTGAACAAATTAACTACACTGCGAGAATATATTGACGACACAGAAGATTATATCAATATCCAGCTCGATAATCATCGAAATCAACTCATCCAGTTGGAGCTGTTTTTAAGTTCTGGAACGGTTTGTATGTCTATCTATTCATTGGTGAGTGCCATATTTGGAATGAATATTCCATATACTTGGAATGACGACCATGGATACATGTTTAAATGGGTTGTCATTGTTTCTGGAGTAGCTTGTGCTTTGCTGTTCGTGGTGATTGTTTACTATGCTCGCCTCAAAGGTTTGGTGGGGTCTTGA 1158 44.73 MARDGHVVPVDPQTALTVKKKKQSSRSWILLDCSGQGTVLDVDKYAIMHRVQIHARDLRILDPLLSYPSKILGRERAIVLNLEHIKAIITAEEVLLRDPTDEHVIPVVEELQRRLPPSNVFQEYQGGLHDGEAEEDESPFEFRALEVALEAICSFLAARTTELETAAYPALDELTTKISSRNLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKTSSSSPVSGSGPANWFPASPTIGSKISRASRASIATARGDEDDIEELEMLLEAYFMQIDGTLNKLTTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTVCMSIYSLVSAIFGMNIPYTWNDDHGYMFKWVVIVSGVACALLFVVIVYYARLKGLVGS 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6846508 6851630 - Carg15873-RA Car08g00995 153569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g00995 385 Gene3D - 14 99 - -
Car08g00995 385 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 385 - -
Car08g00995 385 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 321 374 IPR045863 -
Car08g00995 385 Pfam CorA-like Mg2+ transporter protein 259 373 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car08g00995 385 Coils Coil 186 213 - -
Car08g00995 385 Gene3D Magnesium transport protein CorA, transmembrane region 103 315 - -
Car08g00995 385 CDD Mrs2_Mfm1p-like 28 382 IPR039204 -
Car08g00995 385 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 385 IPR039204 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g00995 Car17g00166 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00995 Car-Chr8:6846508 Car14g00950 Car-Chr14:5749064 4.53E-123 dispersed
Car17g00166 Car-Chr17:1027434 Car08g00995 Car-Chr8:6846508 0 wgd
Car19g00047 Car-Chr19:324073 Car08g00995 Car-Chr8:6846508 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g00995 K16075 - csv:101203841 652.899