Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01006 ATGAGTGCCGGCGCGGCGACGTTCCGGTCTATACTCGACAAACCCCTCAACCAGCTGACGGAGGATGACATTTCGCAGCTCACGCGAGAGGACTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCGTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTGTTTGAAAGCATTGCTTGAACCTTGTGATGATTCCGGCGCCAGTGCTCTCAGGAAGGTCGCCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGGTTCACCCAGGGAACCGAGTGATGATGCTCAGGTTACGATATCAGTTGATGAATCTGCGTATAGCAATATGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGCTGAACCAGACAACAAGGTCACTAGTCCCAGAGATCAATGTGATACACATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCAGCAGATAAGGCATGGGCAATCATGCATCTAGCAGCTAGTCCAGTTCATTTCCCTCAGAATCACACCATGGAGAAGATGGTTGAGTACCCTCAGCAGCAGCAGCAGCAGCAGCATATAAAAGGAACCAGTACTCGAGATTCTGATATTGAGGGTCAGGCGAGTCGGAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGTTAAAGAACAAGAAAAATACAGGATTGGCTTCTTCTAGCCTGGAGGGGTATATGAACCATCAAATGAGGACGCATATATCCAATAAGAATTTAGGTCAGATTGTGACAAGCTCTTTATCCCCAACTGGAGTAGCAAAAGCCTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGCATGCTTCCCTGTCGACCTTAATATATCCAGGAGTGCTGAGTTGATGACATGCTCTACTTCAGAGATCATCCTTGTGATTAGCAAGAACTTGAGAGAGAAGAGGAGCGAAGTCGAAATGGTTGTCTGTTGCACGATTTGGCTGCTTAAGGAGCGTTATGTAGGCCTTTACTAA 1035 46.76 MSAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGASALRKVAVSPRVNSNQGGSPREPSDDAQVTISVDESAYSNMETAKSTPEDPPAEPDNKVTSPRDQCDTHGVDGQMTIFYCGKVNVYDGVPADKAWAIMHLAASPVHFPQNHTMEKMVEYPQQQQQQQHIKGTSTRDSDIEGQASRKVSLQRYLEKRKDRLKNKKNTGLASSSLEGYMNHQMRTHISNKNLGQIVTSSLSPTGVAKAFVGTADNQPKLACFPVDLNISRSAELMTCSTSEIILVISKNLREKRSEVEMVVCCTIWLLKERYVGLY 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 6906738 6910988 - Carg15884-RA Car08g01006 153580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01006 344 ProSiteProfiles Tify domain profile. 138 173 IPR010399 -
Car08g01006 344 MobiDBLite consensus disorder prediction 189 215 - -
Car08g01006 344 MobiDBLite consensus disorder prediction 110 138 - -
Car08g01006 344 Pfam Jas motif 212 233 IPR018467 -
Car08g01006 344 Pfam tify domain 144 172 IPR010399 -
Car08g01006 344 MobiDBLite consensus disorder prediction 79 98 - -
Car08g01006 344 MobiDBLite consensus disorder prediction 119 135 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01006 Car17g00183 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01006 Car-Chr8:6906738 Car14g01057 Car-Chr14:9321681 3.65E-09 dispersed
Car17g00183 Car-Chr17:1121634 Car08g01006 Car-Chr8:6906738 1.88E-176 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4009 PF06200 tify 4.90E-15 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01006 - - bhj:120092625 520.005