Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car08g01006 | ATGAGTGCCGGCGCGGCGACGTTCCGGTCTATACTCGACAAACCCCTCAACCAGCTGACGGAGGATGACATTTCGCAGCTCACGCGAGAGGACTGTCGCAAATACCTAAAAGAAAAAGGAATGCGGCGGCCCTCGTGGAACAAATCTCAGGCGATCCAGCAGGTTATTTGTTTGAAAGCATTGCTTGAACCTTGTGATGATTCCGGCGCCAGTGCTCTCAGGAAGGTCGCCGTTTCGCCTCGGGTGAATTCAAATCAAGGCGGTTCACCCAGGGAACCGAGTGATGATGCTCAGGTTACGATATCAGTTGATGAATCTGCGTATAGCAATATGGAGACTGCAAAATCTACTCCTGAGGATCCACCGGCTGAACCAGACAACAAGGTCACTAGTCCCAGAGATCAATGTGATACACATGGAGTGGATGGCCAAATGACAATTTTCTATTGTGGCAAGGTGAATGTGTATGATGGAGTTCCAGCAGATAAGGCATGGGCAATCATGCATCTAGCAGCTAGTCCAGTTCATTTCCCTCAGAATCACACCATGGAGAAGATGGTTGAGTACCCTCAGCAGCAGCAGCAGCAGCAGCATATAAAAGGAACCAGTACTCGAGATTCTGATATTGAGGGTCAGGCGAGTCGGAAAGTTTCATTACAGAGATATCTTGAAAAGCGAAAAGACAGGTTAAAGAACAAGAAAAATACAGGATTGGCTTCTTCTAGCCTGGAGGGGTATATGAACCATCAAATGAGGACGCATATATCCAATAAGAATTTAGGTCAGATTGTGACAAGCTCTTTATCCCCAACTGGAGTAGCAAAAGCCTTCGTTGGAACAGCTGACAATCAGCCAAAACTTGCATGCTTCCCTGTCGACCTTAATATATCCAGGAGTGCTGAGTTGATGACATGCTCTACTTCAGAGATCATCCTTGTGATTAGCAAGAACTTGAGAGAGAAGAGGAGCGAAGTCGAAATGGTTGTCTGTTGCACGATTTGGCTGCTTAAGGAGCGTTATGTAGGCCTTTACTAA | 1035 | 46.76 | MSAGAATFRSILDKPLNQLTEDDISQLTREDCRKYLKEKGMRRPSWNKSQAIQQVICLKALLEPCDDSGASALRKVAVSPRVNSNQGGSPREPSDDAQVTISVDESAYSNMETAKSTPEDPPAEPDNKVTSPRDQCDTHGVDGQMTIFYCGKVNVYDGVPADKAWAIMHLAASPVHFPQNHTMEKMVEYPQQQQQQQHIKGTSTRDSDIEGQASRKVSLQRYLEKRKDRLKNKKNTGLASSSLEGYMNHQMRTHISNKNLGQIVTSSLSPTGVAKAFVGTADNQPKLACFPVDLNISRSAELMTCSTSEIILVISKNLREKRSEVEMVVCCTIWLLKERYVGLY | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 6906738 | 6910988 | - | Carg15884-RA | Car08g01006 | 153580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car08g01006 | 344 | ProSiteProfiles | Tify domain profile. | 138 | 173 | IPR010399 | - | |
Car08g01006 | 344 | MobiDBLite | consensus disorder prediction | 189 | 215 | - | - | |
Car08g01006 | 344 | MobiDBLite | consensus disorder prediction | 110 | 138 | - | - | |
Car08g01006 | 344 | Pfam | Jas motif | 212 | 233 | IPR018467 | - | |
Car08g01006 | 344 | Pfam | tify domain | 144 | 172 | IPR010399 | - | |
Car08g01006 | 344 | MobiDBLite | consensus disorder prediction | 79 | 98 | - | - | |
Car08g01006 | 344 | MobiDBLite | consensus disorder prediction | 119 | 135 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car08g01006 | Car17g00183 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car08g01006 | Car-Chr8:6906738 | Car14g01057 | Car-Chr14:9321681 | 3.65E-09 | dispersed | |
Car17g00183 | Car-Chr17:1121634 | Car08g01006 | Car-Chr8:6906738 | 1.88E-176 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
4009 | PF06200 | tify | 4.90E-15 | No_clan | Car | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car08g01006 | - | - | bhj:120092625 | 520.005 |