Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01027 ATGAATGGTGAAACAACCTCTGATTATGTGGAAGTTGATCCCACAGGGAGATATGGAAGATACGATGAAGTTCTTGGCAAAGGAGCTTCGAAGACAGTTTACAGAGCCTTTGATGAATACGATGGCATTGAAGTGGCGTGGAATCAAGTGAAGCTTTGTGATTTTCTTCAAACTCCCGAAGATCTCGAACGGCTATACAGAGAAATCCATTTGTTGAAGACTCTTAAACACAAAAACATAATGAAATTTTGTTCTTCTTGGGTTGACACTGCGAATAGAAACATTAACTTTGTGACAGAGATGTTCACTTCTGGAACTCTTAGACAATACAGGCTGAAGCACAAGAGAGTAAACATCAGAGCTGTGAAGCATTGGTGCAGACAGATTTTAAGAGGGCTTCTTTATCTTCATAGCCATGAGCCTCCTGTAATCCACAGAGATCTTAAATGTGATAATATTTTTGTTAATGGGAATCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCTGTTCTTCGTAAATCCTATGTTGCTCGTTGTGTTGGAACGCCTGAGTTCATGGCTCCAGAGATTTATGAAGAGGAGTATAATGAATTGGTTGATATCTATTCTTTTGGAATGTGCATTCTGGAGATGGTTACTTTTGAATATCCATACAGTGAATGCAGCCACCCTGCTCAGATTTACAAGAAAGTTATCTCTGGGAAGAAACCAGATGCTTTGTATAAGGTAAAGGATCTCGAGGTTCGGTGTTTCGTCGAGAAATGCTTGGCTACCGTATCTACTCGGCTTTCTGCTAGGGAGCTTTTGAATGATCCTTTTCTTCAAATTGATGGTTATGATTGTGATTCCTTGCTGAGGCCAATTGATGGAGTTCCTCATGGTCCCTTGGCTAATGGGTATGGGAAGGTTTTGGATTACGGTCCGATCGATGATGAAGTGAACGAGATCGATCTTTTCTCCGGTCAAGAGGACGAGCATTTGGCAGATGATGATATTACTATCAAAGGGAGAAGGAGAGACGACGACGATATATTTCTACGACTTCGAATTGCAGATAAAGAAGGTCGGATTCGAAACATCTACTTCCCGTTCGATTTGGAGAATGATAGTGCTTTGAGTGTTGCAAATGAGATGGTTTCTGAGCTTGATATCACTGATCAAGATGTGAAGAAGATTGCTGATATGATTGATGGCGAAATTGCTACATTGGTGCCTGAATGGAAGAGGGGAACAAGCTTAGAGGAAGCTCTAGATTGCACTGATTCTAATGTTTGTGCTTTAAATAGTAATCTTTTGGATTATGTTTCGCCTCAAAATCCTGCACACCTGCACATTCTTCAGTGCTCTCAAGAACATGGCTGTGCTTCCATCCATGGCCGTTTTGAAGAGATCACATATCAAGTCGAAGGGTCGGAACAGTTCAATGGAGAGGAGGATTCGAGCGATATCCACTATGCCGATATTTGGGCACAACGAGATGGACCGGAGGTTGTTTCACATGAACATGGAGAACTCAGTTGCAATGAACGACATGGAATGTCGGAGAAGCCGAAACTTAGAACAGAATTCGAAACGAGAAACTCTAGCTCGTTGAATCATTCGATGTCGTTCACCGATGATCACGAGAACGAAATTCGACAAGAACTCAGATGGCTCAAGGCTAAATATCAAATGCAGTTGAGGGAGCTAAGAGATCGACAGTTAGGAGTCAAAACGAAATCCGTTAGCTTGCACCCGAATCCCAACATCGCCGAGATCGACATTGGGAAGGACATTGCTTCACATTCCCTCCATGTTGCTGATAACATGTCGGAAAACCAGACATTTCGAGACGAGAACGTTGTGGACGAGTCGAGTATTCCCGAGCTGATGTTTACGGGCAAGAGTTTCTATACGGGAGCGTTGGTGCCTCATTCTCTACAAAGGGCAACTTCCCTTCCTGTTGATGCCATTGATTTTTAG 1968 42.68 MNGETTSDYVEVDPTGRYGRYDEVLGKGASKTVYRAFDEYDGIEVAWNQVKLCDFLQTPEDLERLYREIHLLKTLKHKNIMKFCSSWVDTANRNINFVTEMFTSGTLRQYRLKHKRVNIRAVKHWCRQILRGLLYLHSHEPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAVLRKSYVARCVGTPEFMAPEIYEEEYNELVDIYSFGMCILEMVTFEYPYSECSHPAQIYKKVISGKKPDALYKVKDLEVRCFVEKCLATVSTRLSARELLNDPFLQIDGYDCDSLLRPIDGVPHGPLANGYGKVLDYGPIDDEVNEIDLFSGQEDEHLADDDITIKGRRRDDDDIFLRLRIADKEGRIRNIYFPFDLENDSALSVANEMVSELDITDQDVKKIADMIDGEIATLVPEWKRGTSLEEALDCTDSNVCALNSNLLDYVSPQNPAHLHILQCSQEHGCASIHGRFEEITYQVEGSEQFNGEEDSSDIHYADIWAQRDGPEVVSHEHGELSCNERHGMSEKPKLRTEFETRNSSSLNHSMSFTDDHENEIRQELRWLKAKYQMQLRELRDRQLGVKTKSVSLHPNPNIAEIDIGKDIASHSLHVADNMSENQTFRDENVVDESSIPELMFTGKSFYTGALVPHSLQRATSLPVDAIDF 655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7007254 7010863 - Carg15906-RA Car08g01027 153601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01027 655 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 347 401 IPR024678 GO:0004674|GO:0005524
Car08g01027 655 Pfam Protein kinase domain 22 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01027 655 ProSiteProfiles Protein kinase domain profile. 19 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01027 655 Coils Coil 548 568 - -
Car08g01027 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01027 Car17g00216 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00510 Car-Chr2:3991606 Car08g01027 Car-Chr8:7007254 5.89E-153 dispersed
Car02g00684 Car-Chr2:5090692 Car08g01027 Car-Chr8:7007254 3.73E-143 dispersed
Car05g01115 Car-Chr5:10707838 Car08g01027 Car-Chr8:7007254 0 dispersed
Car08g01027 Car-Chr8:7007254 Car12g01079 Car-Chr12:10561342 0 dispersed
Car15g01179 Car-Chr15:9208157 Car08g01027 Car-Chr8:7007254 2.60E-128 dispersed
Car17g00216 Car-Chr17:1308498 Car08g01027 Car-Chr8:7007254 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89066 PF00069 Pkinase 1.60E-48 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01027 K08867 - csv:101210511 1062.37