Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01038 ATGACGATGGAGATACCAGGGCGCATTGTCGCTGTTCTTCTCCTTATGCTACTTCTCCTCCTCCTCCTCCTATTCATCCTCCTCGTTGCCTGCAAACCATGGCGCTTCTTTTCCTATTCCCTTTCTCGCACCATCAAGGTTCATGACCTTGAGAGACCCCTTGTCTCTGATGCTGCGGTTGTCACTCAAAACCAAATCAATGAACTTCCGAGAGATTATGATTTGGAGGGTGCACTTCAAACTGATGGGCATTTTCGGTCCCCAAGTTTACACGGATTGATCCACAAGCAAAGACTACCTGCTGCGTCTCCCCATTTATGTCAGGGCGATAGATTGGTTCCAGATGTAGTTGCTGATCCTTTAGACGATATTTCTGTTGGTCAAACACTTAAACGTTCATATTTCACAAGCCAGATTCCAGAAGTTCGAAAGCATGCGAAACCGAGCATAGGAAGTGATCAACCCCACGAGTCTGCAAGTCAAGTTATCTCACATGGAAGAAGTTACCTCACTTTGGAGGTTACCTCCGGTCCTTCTCGTGGAGTGCGCTATTCCATACATTCTGCGGACATATCTAGGCTCCAGTTGACCCTTGGAAGAGCACCTCCTAGTGATATACAGCTAAAGGATTCAGAAGTTTCAGGGAAGCATGCCTCAATAAAATGGAATCTAAATAATATGAAATGGGAGCTTGTGGACCTGGGTAGCTTAAATGGGACCTTATTAAATTCTCAACCAATCAGCAATCCCGATTCTGGAATTAGACAGTTGAGTGACCCAGTTGAGCTTGCTAGTGGAGATGTTATAACTCTTGGTACAAGCTCCACTGTGTATGTTCAAATTACATCTGAGATTGAGAGCCATATTCCTTTTGGAGTTGGGATGGCTTCAGATCCAATGGCGTTACGTCGAGGTGGAAAGAAATTTGCCATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGGTTGATCAGTTTGGACTCTTTGGTATCTGCGATGGGCATAGTGGAGTAGGGGCTGCCAAATCTGCTAGCGAGTTAGTATCTGTTTTTAACTTCAGTGTTTCTGCTTATAATTATTACTTTCCGAATGAATCTAAAAGAAACATGAAAATATTTGGCATTTATATACCACAAAAAACTTGCAGAAACTTCAGTATGACGTTCATAATGATTCTTCCGGAGAAGGTCGCCACAATTCTATCTGATCCACTAAAGAGGGAGAGGGTAGTATCTCTTTGTGATGCTTCAGATGTTCTTAGAGAAGCATTTTCTCAGACTGAAGCTTGCATGAATCACTATTATGAGGGTTGTACTGCCACGGTGCTTTTGGTATGGGCTGATAATGACGATAATTACTTCGTGCAATGTGCGAATGTCGGGGACTCTGCTTGTGTTATGAATGTTCATGGGAAGCTTATAAGGATGACAGAAGACCACAGGATAACTAGCTATTCAGAAAGACTCCGAATAGAACAAGCAGGAGAACCATTGAAAGATGGGGAGACACGTTTGTGTGGCTTGAACCTTGCAAGGATGCTTGGTGATAAGTTTCTTAAACAACAAGACCATCGCTTCAGTTCAGAACCTTATATTAGCGAAGTTGTCCATGTAGATCAAGGAAGCAAAGCTTTTGCGGTGATGGCAAGTGATGGCTTTTGGGATGTGATTGGTGTGAAGAAGGCAATTCAGCTGGTCCTTCAGGCTAGGGAAAGATACTCCACAGGTGCAGAAAAGTCGGCCGAAAAGATGGCCAATTTTTTGTTGGGCGAGGCTAGAACACTGCGTACAAAAGATAACACTTCTATTATTTTCTTAGATTTTGACGTTCCTCATAGAATCACTTGTAAAGTTGAACCGTGA 1866 43.3 MTMEIPGRIVAVLLLMLLLLLLLLFILLVACKPWRFFSYSLSRTIKVHDLERPLVSDAAVVTQNQINELPRDYDLEGALQTDGHFRSPSLHGLIHKQRLPAASPHLCQGDRLVPDVVADPLDDISVGQTLKRSYFTSQIPEVRKHAKPSIGSDQPHESASQVISHGRSYLTLEVTSGPSRGVRYSIHSADISRLQLTLGRAPPSDIQLKDSEVSGKHASIKWNLNNMKWELVDLGSLNGTLLNSQPISNPDSGIRQLSDPVELASGDVITLGTSSTVYVQITSEIESHIPFGVGMASDPMALRRGGKKFAMEDVCYYQWPLPGVDQFGLFGICDGHSGVGAAKSASELVSVFNFSVSAYNYYFPNESKRNMKIFGIYIPQKTCRNFSMTFIMILPEKVATILSDPLKRERVVSLCDASDVLREAFSQTEACMNHYYEGCTATVLLVWADNDDNYFVQCANVGDSACVMNVHGKLIRMTEDHRITSYSERLRIEQAGEPLKDGETRLCGLNLARMLGDKFLKQQDHRFSSEPYISEVVHVDQGSKAFAVMASDGFWDVIGVKKAIQLVLQARERYSTGAEKSAEKMANFLLGEARTLRTKDNTSIIFLDFDVPHRITCKVEP 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7100785 7106124 - Carg15917-RA Car08g01038 153612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01038 621 ProSiteProfiles PPM-type phosphatase domain profile. 292 609 IPR001932 -
Car08g01038 621 Pfam Protein phosphatase 2C 306 602 IPR001932 -
Car08g01038 621 Pfam FHA domain 197 272 IPR000253 GO:0005515
Car08g01038 621 ProSiteProfiles Forkhead-associated (FHA) domain profile. 196 247 IPR000253 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01038 Car17g00230 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01038 Car-Chr8:7100785 Car09g00337 Car-Chr9:1867742 8.14E-14 dispersed
Car17g00230 Car-Chr17:1416815 Car08g01038 Car-Chr8:7100785 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01038 K01090 - csv:101217195 924.85