Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01053 ATGCAGTCGTCTATAGATGTGGATTTCTTCACAGAATATGGTGAAGGGAGCAGGTATAAAATAGAGGAAGTAATTGGTAAAGGAAGTTATGGTGTTGTTTGCTCTGCATATGATACTCATACGGGGGAAAAAGTTGCAATTAAGAAAATCAACGATATCTTTGAGCATGTCTCTGATGCAACTCGCATTCTTCGTGAGATAAAACTTTTAAGATTATTGAGACATCCAGACATTGTAGAGATAAAGCACATCCTACTACCTCCATCTAGAAGGGAATTCAGGGATATATATGTTGTGTTTGAGCTCATGGAATCTGATTTACACCAAGTTATCAAAGCAAACGACGATTTGACTCCAGAACATTATCAGTTCTTTCTTTACCAGCTTCTTCGTGGCTTGAAATATATACACACAGCAAACGTCTTCCACAGGGACCTAAAACCCAAAAACATCTTAGCAAATGCTGACTGCAAACTCAAGATCTGTGACTTTGGTCTAGCCAGAGTTGCTTTTCATGATACTCCTACTGCTATTTTCTGGACTGACTATGTAGCAACAAGGTGGTACAGGGCTCCTGAACTGTGCGGTTCATTTTTCTCAAAGTATACACCAGCAATAGATATATGGAGCATTGGTTGCATCTTTGCAGAGCTTTTAACTGGAAAACCACTTTTCCCTGGAAAGAATGTCGTGCACCAATTAGATTTGATGACAGATTTTCTGGGAACCCCTAATGCAGAAGCCATTGCCAGGATACGAAATGAGAAAGCTCGGAGATACTTAAGCAGTATGCGAAAGAAGAAGCCTGTTCCTTTCTCCCAGAAGTTTCCTCATGCAGATCCCCGAGCACTTCCCTTATTGGAAAGAATGTTGGCTTTTGAGCCAAAGGATCGACCTACAGCAGAGGAGGCCCTTGCAGATCCATATTTTAAAGGCTTAGCGAAGGTTGAAAGAGAGCCATCTGCTCAACCTGTCACTAAGATGGAATTTGAATTTGAGAGACGAAGAATTACCAAAGAAGATGTTAGGGAGCTTATTTACCGGGAAATTCTCGAGTACCATCCAAAGATGTTGAAGGAGTTCTTAGATGGATCAGAACCTACCAGTTTCATGTATCCAAGTGCAGTTGACCACTTTAAGAAGCAATTTGCATACCTTGAAGAACACTATGGAAATGGTGCAACCGTTGCCCCTCCTGAAAGACAACATGCATCCTTGCCGAGGCAATGTGTTTTATATTCAGATAACATGGTACAGAACTCGGCACAAGTTGTGAATGACCTATCCAAATGTTCCATCAAAGAAGTTGAGAGGCCACAAGTGGATAGGACTTGCAATATTCCTTCAACTAGAGCTCCTATTCAAGTTCCTCAATCTATTCAAGGCAATGCTGCAAGGCCTGGAAAAGTTGTTGGCTCTGTGTTGCGGTACAACTGTGGGGCTACAGCAGCAGCAGTGGTACCAGAAGTTCTTGAACAGCGGAGGACGACCAGAAACCCTTCCATTCCACCACAGTACGCCCCTAATAACTGTTCATATCCTAGAAGAAACTCATCATGTAAAAATGATACGACTGAAGATGAAGCCATCGAAGGTTCGAATGGACTGCAGCCAAAACCTCAGTACATAGCTAGAAAAGTTGCTGCTGCCCAAGGCGGACCAGGAAATAACTGGTACTGA 1680 42.38 MQSSIDVDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFHDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPNAEAIARIRNEKARRYLSSMRKKKPVPFSQKFPHADPRALPLLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEFLDGSEPTSFMYPSAVDHFKKQFAYLEEHYGNGATVAPPERQHASLPRQCVLYSDNMVQNSAQVVNDLSKCSIKEVERPQVDRTCNIPSTRAPIQVPQSIQGNAARPGKVVGSVLRYNCGATAAAVVPEVLEQRRTTRNPSIPPQYAPNNCSYPRRNSSCKNDTTEDEAIEGSNGLQPKPQYIARKVAAAQGGPGNNWY 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7204705 7209357 + Carg15932-RA Car08g01053 153627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01053 559 ProSiteProfiles Protein kinase domain profile. 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01053 559 ProSitePatterns MAP kinase signature. 54 157 IPR003527 GO:0004707|GO:0005524|GO:0006468
Car08g01053 559 MobiDBLite consensus disorder prediction 494 538 - -
Car08g01053 559 Pfam Protein kinase domain 19 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car08g01053 559 ProSitePatterns Protein kinases ATP-binding region signature. 25 49 IPR017441 GO:0005524
Car08g01053 559 MobiDBLite consensus disorder prediction 494 519 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01053 Car17g00253 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01053 Car-Chr8:7204705 Car11g00281 Car-Chr11:1535991 0 dispersed
Car13g00832 Car-Chr13:9009266 Car08g01053 Car-Chr8:7204705 1.73E-180 dispersed
Car15g01126 Car-Chr15:8878926 Car08g01053 Car-Chr8:7204705 2.71E-117 dispersed
Car17g00415 Car-Chr17:2757354 Car08g01053 Car-Chr8:7204705 4.43E-107 dispersed
Car17g00253 Car-Chr17:1566217 Car08g01053 Car-Chr8:7204705 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89067 PF00069 Pkinase 1.20E-67 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01053 - K04371 csv:101216364 1075.08