Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01063 ATGGGTTGTATCCACACAAAATGTTGCTGTCGGTACCCAAAATCATTGGTTGGAGAATCCCAGGACTTTCACCAAGGGGTTCCTTACTGCCTACAAGATAACAACACTGTGATAGAAAGAGCATTGGAGCTTATTCCTGTGGCTTCCCACAACTATCATTTGGATTACTTGGTATTGGCTCAGCGTGGTTACTACCCTGAATCTCCTGATAAAGAAAATCAAGACAGTTTCTGTATTAGAACAAATGTTCAAGGTAACCCAAATGCTCACTTTTTTGGTGTTTTTGATGGGCATGGTCAATTTGGAATGCAGTGTTCAAATTTTGTGAAGGACAGGTTAATAGAAAAGCTATGTAATGATCCCACATTGTTAGATGATCCTGTTCAAGCTTATAATTCAGCGTTTTTATCCACTAATGATGAACTGCATTCAAGTGAAATAGATGATTCCATGAGTGGAACAACAGCAATTACAGTCCTTGTTGTTGGGGATACTCTTTATGTAGCCAATGTGGGTGATTCAAGAGCTGTAATTGCTGTTAAAGAAGGGAATTGTGTTCTTGCCAAAGATTTGTCAAATGATCAAACACCATTTAGAAAGGATGAATATGAGAGGGTTAAGCTTTGTGGAGCTAGAGTTCTTAGTGTTGATCAAGTGGAAGGACTTGTGGATCCTGATATTCAATGCTGGGGTGATGAAGAAAGTCAGGGCGGCGATCCGCCTCGACTTTGGGTTCAAAATGGGCTGTATCCTGGGACTGCATTTACCAGGAGCATAGGTGATAGTACCGCCGAGCAGATCGGTGTAAATGCTGTTCCTGAGGTTTTAGTTCTTCAGCTCAACCCCAATCATCTTTTCTTTGTGGTTGCTAGTGATGGAGTTTTCGAGTTCCTTTCAAGCCAAACTGTTGTTGATATGGCATCAAGTTATGCAGATCCTCAAGATGCATGTACCGCCATAGCTGCCGAGTCGTATAAACTATGGATGGAACATGAAAATCGTACCGATGATATAACCATCATTATTATTCATATCAAAGGCTTGTCTAATCTTGTGAACCTTGTTGCTGCTCCCTTATATGAAGAACCTGAAGTGAAGGACGATCATTCATTTAGCTGCTCGACTTTCTCGTCCGCTTCGCTCCGAGTGATTCTCCGGCGGCGTATCCACCGGTCGGACCCAAATTATGCAGAATGGAAACACACGGAGGTAAAGATTATGTTTCCTTAA 1230 41.87 MGCIHTKCCCRYPKSLVGESQDFHQGVPYCLQDNNTVIERALELIPVASHNYHLDYLVLAQRGYYPESPDKENQDSFCIRTNVQGNPNAHFFGVFDGHGQFGMQCSNFVKDRLIEKLCNDPTLLDDPVQAYNSAFLSTNDELHSSEIDDSMSGTTAITVLVVGDTLYVANVGDSRAVIAVKEGNCVLAKDLSNDQTPFRKDEYERVKLCGARVLSVDQVEGLVDPDIQCWGDEESQGGDPPRLWVQNGLYPGTAFTRSIGDSTAEQIGVNAVPEVLVLQLNPNHLFFVVASDGVFEFLSSQTVVDMASSYADPQDACTAIAAESYKLWMEHENRTDDITIIIIHIKGLSNLVNLVAAPLYEEPEVKDDHSFSCSTFSSASLRVILRRRIHRSDPNYAEWKHTEVKIMFP 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7266066 7269236 + Carg15942-RA Car08g01063 153637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01063 409 Pfam Protein phosphatase 2C 74 324 IPR001932 -
Car08g01063 409 ProSiteProfiles PPM-type phosphatase domain profile. 55 345 IPR001932 -
Car08g01063 409 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01063 Car14g01498 CCT
Car08g01063 Car17g00262 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01063 Car-Chr8:7266066 Car10g00592 Car-Chr10:2991853 4.36E-142 dispersed
Car14g01498 Car-Chr14:12409636 Car08g01063 Car-Chr8:7266066 3.46E-172 wgd
Car17g00262 Car-Chr17:1625720 Car08g01063 Car-Chr8:7266066 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01063 - - cmax:111494336 714.146