Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01073 ATGAGAGCTTCAAATCATGGCTTCTTCTCCCTCTTTTCTGTACTGCTTCTCAGTACTCTCCTTGCTGTTCAAGCCGTCCCCAAGGGCGCTCTGAGCAATAATGCCTATTGGCGAACCTGCCCCAAAGCTTTGAGAATTATCCGAGACACCACCTTCCGACTCGCTCGATCGAACCCCGGTCTCGGAGCGCAACTCCTCCGAGTTCAATTCCACGACTGCTTCGTTCGGGGATGTGATGCATCGGTTCTGTTAGATAGTATCACCGGAAACCCGTCGGAGAAGGAAGCAAGACCGAACTTATCGCTATTAGGGTTCGATGCCATTGACACAATCAAGTCGGAGGTTGAGAAGGCTTGCCCTGGAGTTGTCTCGTGTGCCGACATTCTTGCCGTTGCTGCTCGTGATGCTGTTTCCTTTCCGTTCAAAAACCGGCAGCTGTGGCCAGTTTTAACCGGAAGAAGAGATGGAACTGTTTCGCGATCATCAGAAGTTACCGGCAATATCCCGTCGCCGTTCTCTAAATTCACCACTCTTAAGCAAATCTTTGAGAATAAAGGCCTTACCGTGAGCGATCTGGTGATTTTATCAGGTGGGCATACAATTGGAGTAGCTCATTGTGGCACATTCTCAAGGAGGCTCTACAACTTCACAGGCCAAGGGGACGCAGATCCTTCATTAAATCCAATCTACGCCAACTTTCTAAGACAAAAATGTCCAAATCCAGCTGATTCTTCAATTACAGTAGAAATGGACCCAAAGAGTTCACGTTCATTTGACACTGATTATTTCAAGATCCTCACACAGCACAAAGGTTTGTTTCAATCCGACGCTGCGCTCTTGACCGACGACTCGTCGTCTCGGATCGTCAAAGAGTTGCAGAAGCCCAAAGCTTTCTTCCCTAGCTTTGCTAACTCCATGTTGAAGATGTCAGCCATTGAAGTCCTCACTGGAAAGAATGGTGAAATCAGGAAACGATGTCGTTTTGTTAATTGA 993 47.63 MRASNHGFFSLFSVLLLSTLLAVQAVPKGALSNNAYWRTCPKALRIIRDTTFRLARSNPGLGAQLLRVQFHDCFVRGCDASVLLDSITGNPSEKEARPNLSLLGFDAIDTIKSEVEKACPGVVSCADILAVAARDAVSFPFKNRQLWPVLTGRRDGTVSRSSEVTGNIPSPFSKFTTLKQIFENKGLTVSDLVILSGGHTIGVAHCGTFSRRLYNFTGQGDADPSLNPIYANFLRQKCPNPADSSITVEMDPKSSRSFDTDYFKILTQHKGLFQSDAALLTDDSSSRIVKELQKPKAFFPSFANSMLKMSAIEVLTGKNGEIRKRCRFVN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7309057 7310752 - Carg15952-RA Car08g01073 153647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01073 330 Pfam Peroxidase 53 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01073 330 ProSitePatterns Peroxidases active site signature. 62 73 IPR019794 GO:0004601
Car08g01073 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Car08g01073 330 ProSiteProfiles Plant heme peroxidase family profile. 30 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00133 Car-Chr2:772945 Car08g01073 Car-Chr8:7309057 2.51E-60 dispersed
Car08g01073 Car-Chr8:7309057 Car18g01118 Car-Chr18:11187680 1.71E-88 dispersed
Car08g01073 Car-Chr8:7309057 Car11g01524 Car-Chr11:12264702 3.68E-99 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01073 K00430 - csv:101215642 495.738