Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01079 ATGGCGTCTGAAATGATTGTCGAATCAGGCTCGTCGATAATAGATTTTGGGATGGAGTTAGTCGCTGATCATACTTCGGTGGTTTCTTTAAACTTATTTGTAGCTCTTCTTTGTGGTTGCATTGTTGTTGGTCATTTGTTAGAGGAAAACCGATGGATCAACGAGTCCATTACAGCCCTTGTCATTGGGTTGTGTACCGGCATCATCATATTGCTAACAACTAGAGGGAAAAGTTCGCATTTATTTTTGTTCAATGAAGAGCTTTTCTTTATCTATCTCCTTCCGCCTATCATTTTCAATGCCGGTTTCCAGGTCAAGAAGAAGCAGTTTTTCCGCAACATCATGACCATAGTGCTTTTTGGTGCTTTTGGCACTCTCATATCCTTCTGTATTATATCATTAGGCGCTTTGCACTTCTTCCAGAAAATGAATATTGGTTCTCTTGATCTTGGAGATTATCTTGCTATTGGAGCTATTTTTTCTGCAACAGACTCTGTTTGTACCTTACAGGTTCTTAATCAGGATGAGACCCCTCTCCTGTATAGCCTGGTTTTTGGGGAGGGTGTTGTAAATGATGCCACTTCTGTTGTGCTATTCAATGCAATCCAGAACTTTGATCTGTCTCACATGAATTCAAGCATCATTTTGCAATTCATTGGGAACTTTTTGTATCTGTTCATTGCAAGTACCGTGCTGGGAATTTTAGTTGGCCTCCTTAGTGCATACATAATTAAGAAGCTCTACTTTGGCAGGCATTCTACTGATCGTGAAGTTGCTCTTATGATACTCATGGCGTACTTTTCTTATATGCTAGCTGAACTCTTCTATTTAAGTGCAATTCTCACTGTATTCTTTTGCGGTATTGTTATGTCTCACTATACATGGCATAACGTAACTGAAAGTTCCAGAGTTACTACAAAGCATGCTTTCGCCACTCTTTCTTTTGTTGCTGAGATCTTTATCTTTCTTTACGTTGGCATGGATGCTCTTGATATCGAGAAGTGGAGATTTGTTAGCCACAGTCCGGGGAAATCAATTGGGGTGAGCTCAATACTGTTGGGACTGGTTCTGGTTGGAAGAGCAGCCTTCGTTTTTCCATTATCCTCCTTGTCCAATCTGACCAAGAAGTACTCGCATGAAAAACTCAACTTGGAACAACAAGTCACTATTTGGTGGGCCGGTCTCATGCGTGGTGCCGTTTCAATGGCACTTGCATACAATCAGTTCACCAGGTCAGGCCACACCCATTTACCAGGCAATGCAATCTTGATCACCAGTACCATCACAGTTGTTCTTTCCAGCACAGTGTTTTTTGGAATGATGACAAAACCCCTGATAGGGATTCTGCTACCCCAACCAAAATACACAATGAGCATGCTGTCTTCGGAACCCTCATCCCCAAAATCCTTCACAGTGCCACTCCTCACCAACGACGACCCAAACAGCCATTCCCAATCCCAATCCCATTCCCATTCCCCTCTGGGGCTGTTCCTCAGAATCCCGGCCCATACGGTTCACCATTATTGGCGGAGATTCGACGACGCCTTCATGCGCCCTGTTTTTGGAGGGAGGGGCTTTGTGCCCTTCGTCCCTGGCTCCCCTACCGAAGACCCCAACCAACAATGGCAAACTGAAGGACCACTTGAAGCCGCCGTTGATGACAACAAAACCATTCTTATACAGACTCGATGGTAA 1695 43.78 MASEMIVESGSSIIDFGMELVADHTSVVSLNLFVALLCGCIVVGHLLEENRWINESITALVIGLCTGIIILLTTRGKSSHLFLFNEELFFIYLLPPIIFNAGFQVKKKQFFRNIMTIVLFGAFGTLISFCIISLGALHFFQKMNIGSLDLGDYLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQNFDLSHMNSSIILQFIGNFLYLFIASTVLGILVGLLSAYIIKKLYFGRHSTDREVALMILMAYFSYMLAELFYLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATLSFVAEIFIFLYVGMDALDIEKWRFVSHSPGKSIGVSSILLGLVLVGRAAFVFPLSSLSNLTKKYSHEKLNLEQQVTIWWAGLMRGAVSMALAYNQFTRSGHTHLPGNAILITSTITVVLSSTVFFGMMTKPLIGILLPQPKYTMSMLSSEPSSPKSFTVPLLTNDDPNSHSQSQSHSHSPLGLFLRIPAHTVHHYWRRFDDAFMRPVFGGRGFVPFVPGSPTEDPNQQWQTEGPLEAAVDDNKTILIQTRW 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7346810 7352606 - Carg15958-RA Car08g01079 153653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01079 564 MobiDBLite consensus disorder prediction 470 490 - -
Car08g01079 564 Pfam Sodium/hydrogen exchanger family 32 445 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01079 Car-Chr8:7346810 Car10g00948 Car-Chr10:8052594 0 dispersed
Car08g01079 Car-Chr8:7346810 Car18g00580 Car-Chr18:6521603 1.13E-26 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01079 - - cmos:111436756 1044.26