Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01119 ATGGGATCGGAGCAGTTGATGGCCGGAGGTGGGCCTCGATATGTTCAAATGCAATCGGAGCAGCCTACAGCTTCGATGTCGTCGTTTTTCTCGTTTCATCATGACGCTCCTGAGCCAACGAGGATTTTCGATGAATTGCCGAAGGCCTCAATTATTTCCGTTTCTCGCCCGGATGCCGGTGATATCAGTCCGATGCTTCTTTCTTACACAATCGAATGCCAGTACAAGCAGTTTAAATGGCGCATGTTGAAGAAAGCTTCCCATGTATTCTATTTGCATTTTGCACTAAAGAAACGGGCATTCATTGAGGAAATTCACGAGAAGCAAGAACAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAACACACGACAGTGATCCAAGATGAGGATGGACCAGATGATGAAGCCAATCCTCTGCATCATGATGAAAGTTCTAAAAATAGGGATGTTCCGTCCAGTGCTGCCCTGCCTATCATTCGGCCTGCCTTAGGAAGGCAGCATTCTATGTCTGATAGAGCTAAGACTGCAATGCAAGGGTACCTGAATCACTTCTTGAGTAACATGGATATTGTCAACTCTCGAGAGGTTTGCAGGTTTTTGGAGGTCTCTAAGTTATCATTTTCACCAGAATACGGCCCAAAGTTGAAAGAGGATTATGTTATGGTGAAGCATCTACCTAAAATTGCAAGGGAAGATGACGCTAGGAAATGCTGCCTATGCCGGTGTTTTGGTTGTTGTAATGACAATTGGCAAAAGGTGTGGGCTGTATTAAAACCTGGTTTTTTGGCCTTGTTGGGAGATCCTTTTGACACTCAACCAATGGATATAATAGTTTTTGATGTGCTACCTACTTCTGATGCCAATGGAGATGGACGAGTATCTTTGGCAAAGGAAATTAAGGAGCGAAATCCATTACGACATTCATTTAAGGTGACATGTGGAAATAGGAGCATTAGGATAAGAGCAAAGAACGGATCCAAGGTTAAAGACTGGGTTGCTGCAATTAATGATGCGGGTCTGAGGCCTCCTGAGGGATGGTGTCATCCTCACCGTTTTGGTTCTTTTGCTCCTCCAAGGGGTTTGACAGACGATGGTAGTAAGGCTCAGTGGTTCATCGATGAATTGTATCTGCGGCGTCCTTTTATTTCAAATGCTTCATCTAGGCTCGATGCTTTGCTTGAAGCAAAAGCTAAGGAAGGGGTTCAGATATACATTCTTCTCTACAAAGAGGTTGCCCTTGCTTTAAAGATTAACAGTGTTTATAGCAAGAGAAAACTTCTAGGCATCCATGAGAATGTGAGAGTATTACGCTACCCTGACCACTTCTCCAGTGGTGTGTCCCACCATGAAAAACTTGTCATTGTCGATTATCATATTTGCTTTATTGGAGGACTGGATTTATGCTTTGGTCGTTATGATACACCAGAACATAAAGTTGGTGATCGTCCTCCTTCAGTATGGCCCGGAAAGGACTACTATAATCCAAGGGAATCTGAGCCAAATTCATGGGAAGATACCATGAAAGATGAGTTAGATCGCGGTAAGTATCCTCGCATGCCTTGGCATGATGTCCACTGTGCACTTTGGGGACCACCTTGTCGAGACTTAGCTAGACATTTTGTCCAACGCTGGAATTATGCTAAGAGAAACAAAGCCCCAAATGAGCAGGCAATTCCATTACTTATGCCTCAGCATCATATGGTCATTCCTCATTACTTGTGGAATACCCGAGAATTGGAGGTTGAAAGGAAGAGTTTTGACAATTCTCAAGAATCAACAGTACAGGATTCATTTTCTCGAGGATCATCTTTTCACGATATTCCTTTGCTTTTACCTCAAGAGGCTGATGGACAGGATTCTCAAAATGAAGGTCCAAAATCAAATGGACTGGAACCCATTGCTAATCCCCTCGATCAGCCTAGTAAGATCAGCAGCGGTCTCTCGTTCTCTTTTAGGAAGATCAAAGTTGAACCCTTAGGACCAGATATGCCTCTGAAAGGCTTTGTTGATGATCTCGACCATTTGGATTCCCATGGAAAGTTGTCTGGAGATGGGAAAACACATCATCGTGTCAAAAGCTCAGAGTTGGAGTGGTGGGAAACACAAGACAGGGGACATGGTGGCTTTGCAGATGAATCCGGACAAGTTGGTCCGTGTGCTTCATGTCGTTGCCAGGTCATCAGAAGTGTCAGTCAATGGTCTGCTGGGACGAGCCGAACTGAAGAGAGCATTCACATTGCATACTGCTCTCTTATAGAGAAAGCAGAACATTTTGTCTATATTGAGAATCAATTTTTTATATCAGGCCTCTCAGGAGATGATTCAATACGGAATCGTGTGTTAGAAGCATTATACCGTCGCATAATGAGAGCCTACCGTGAAAAGAAAACTTTTAGGGTCATTATTGTAATTCCACTCTTGCCTGGATTTCAGGTTCTAGTTCTTGGACAATACCCACTCTCGTCCTTTGCTGGCTTATTGTTTGAGTTTATATCTCTTTTCTCCAATCTGAATCTTGAGTTTAACAGGGAGGACTGGATGACAGTGGTGCAGCATCAGTTAGAGCAATAA 2577 43.46 MGSEQLMAGGGPRYVQMQSEQPTASMSSFFSFHHDAPEPTRIFDELPKASIISVSRPDAGDISPMLLSYTIECQYKQFKWRMLKKASHVFYLHFALKKRAFIEEIHEKQEQVKEWLQNLGIGEHTTVIQDEDGPDDEANPLHHDESSKNRDVPSSAALPIIRPALGRQHSMSDRAKTAMQGYLNHFLSNMDIVNSREVCRFLEVSKLSFSPEYGPKLKEDYVMVKHLPKIAREDDARKCCLCRCFGCCNDNWQKVWAVLKPGFLALLGDPFDTQPMDIIVFDVLPTSDANGDGRVSLAKEIKERNPLRHSFKVTCGNRSIRIRAKNGSKVKDWVAAINDAGLRPPEGWCHPHRFGSFAPPRGLTDDGSKAQWFIDELYLRRPFISNASSRLDALLEAKAKEGVQIYILLYKEVALALKINSVYSKRKLLGIHENVRVLRYPDHFSSGVSHHEKLVIVDYHICFIGGLDLCFGRYDTPEHKVGDRPPSVWPGKDYYNPRESEPNSWEDTMKDELDRGKYPRMPWHDVHCALWGPPCRDLARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLWNTRELEVERKSFDNSQESTVQDSFSRGSSFHDIPLLLPQEADGQDSQNEGPKSNGLEPIANPLDQPSKISSGLSFSFRKIKVEPLGPDMPLKGFVDDLDHLDSHGKLSGDGKTHHRVKSSELEWWETQDRGHGGFADESGQVGPCASCRCQVIRSVSQWSAGTSRTEESIHIAYCSLIEKAEHFVYIENQFFISGLSGDDSIRNRVLEALYRRIMRAYREKKTFRVIIVIPLLPGFQVLVLGQYPLSSFAGLLFEFISLFSNLNLEFNREDWMTVVQHQLEQ 858
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7572827 7582593 + Carg18860-RA Car08g01119 153693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01119 858 MobiDBLite consensus disorder prediction 128 150 - -
Car08g01119 858 Pfam Phospholipase D Active site motif 449 473 IPR001736 GO:0003824
Car08g01119 858 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Car08g01119 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 446 473 IPR001736 GO:0003824
Car08g01119 858 Coils Coil 98 118 - -
Car08g01119 858 Coils Coil 858 858 - -
Car08g01119 858 MobiDBLite consensus disorder prediction 127 153 - -
Car08g01119 858 MobiDBLite consensus disorder prediction 616 643 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01119 Car17g00315 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01119 Car-Chr8:7572827 Car05g00275 Car-Chr5:1508172 7.99E-17 dispersed
Car17g00315 Car-Chr17:1962053 Car08g01119 Car-Chr8:7572827 0 wgd
Car05g00963 Car-Chr5:9219198 Car08g01119 Car-Chr8:7572827 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01119 K01115 - csv:101211856 1549.26