Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01136 ATGTCTCTCGCCATGAAAGCCGACGTTCAAGGAAGCCTTGTTGGCTCGGAGATTCATGGCTTCCATACATTACAAGAATTGGATGTTACAAACATCAGGGAGGAAGCAAGTGGAAGATGGCTTCGCCCAAATGAAATTCATGCAATTCTATGTAACTACAAATATTTTGTCATCCACGTCAAGCCAGTCAACTTGCCCACAAGTGGAACCATTGTACTATTTAACCGCAAGATGCTTAGGAATTTCCGCAAAGATGGACATAATTGGAAGAAAAAAAAGGACGGGAAGACCATAAAAGAAGCACACGAACACCTAAAAGTTGGTAATGTAGAAAGGATACACGTATACTATGCCCATGGCCTAGATAACACAACCTTTGTTCGTCGGTGTTATTGGCTCCTTGATAAGACTCTTGAACACATTGTCCTTGTTCATTACCGTGAAACACAAGAGGTCAATTTTAGCCCAATGCATCTGCAGTTGCAGAGCTCTCCATCCATGTCTATGAATTCAAATTCTGGTTCTGTCTCTGACCCATCAACTCCTTGCCTTTTATCGGAAGAACTTGATTCTAGGGATAATCATGGTTATTCCATTGACAAAAATGAACGTTCAGAGCCAAGAGACACTACAACAGCCATGAATCATGAACAACGGCTTCATGAGATCAACACGCTCGAGTGGGATGAACTTCTTGTGACAGACGAGCCTTTCAAACCTTCCATACCTAAAGGAGACAGATTTTCATACTTTGACCAACGGAGCCAAGTCCCAACAAATGTGGCCAACAATTTATTGGGGAACACGCCTTTGTTTAATAATCCAGTTGAGCCAATTGGGAGTGCCTATATGCCACTAACAAGTGGTCAAACAAATTTAAATGTGGAGAGTAAGGAATCCATTCCAATTACTTCATTGGACAATTTGTTAAATGATGGATTGCTGCAAAGCCAGGACAGCTTTGGACGATGGATAAATGAAGTCATCACTGAGTCTCCTGATACAGTTGATCCTGCCATTGAGCCATCCATTTCATCCATTCACAATTCTTTTACCGATCCAACATTAAATCACTGTCAATCTTCTGTTATGGAGCAAATTTTTAACATAACTGATATCTCACCTGCGTGGGCCTTTTCAACAGAAAAAACCAAGATTCTAATCGCGGGATATTTTCACAATGAGTACTTGCATCTGGCAAACTCCAATATATTGGTCGTGTGTGGTAATGCCAGTGTTAATGCTGATTTAATTCAACCTGGAGTTTATCGATGTGTGGTACAACCACATTCAACTGGACTAGTAAATTTATTCGTGAGCTTAGATGGTCATAAACCTATCAGTCAAGTTCTGAATTTTGAGTATCGTGCACCACTTTTACGAGAGCCTGTAGTTGCTTCAGAACAGATCCAAAAGTGGGAGGAGTTTCAAGTTCAGATGCGGCTTGCTCATCTGTTGTTCTCTACATCCAGAAGCCTGAGCATCATGTCGACTAAATTGTCGCCCACTTCCCTGAACGAGGCCAGGAAATTTGCTGTCAAAACTTCTGACATTTCTGACAGTTGGATTTATTTGTTAAACTCAATAAAAGAAAATAACACTCCATTTCCTCAAGCAAGAGACGGTGTTCTTGAGATCATTTTGAAAAGTAGGTTAAGGGAATGGCTGATAGAAAGAGTTGCTGAAGGCTCAAAGAAAAGCACTGATTTCGATATAAAAGGTCAGGGAGTAATCCATTTGTGTGCCATCTTGGGATATACCTGGGCTATACATCTATTTGCATGGTCTGGTTTATCAATAAATTTTCGAGATAAATTCGGATGGACATCTCTTCACTGGGCAGCTTATTATGGAAGGGAGAAAATGGTAGCTGTTCTTTTGTCAGTTGGGGCAAAACCAAACTTGGTCACTGATCCCTCATCAAAGAACCCTCTGGGATACACAGCTGCAGATCTTGCATCTTTGAATGGTTATGATGGCTTAGCTGCTTATCTTTCTGAAAAGGCTTTGGTGTCACATTTTAATGATATGAGCTTGGCTGGAAATGTTCGTGGTTCATTGGAAACTAGTACTATGACCGATGTCACTAACTCGGATAGCATCAGCGAGGAGCAGATGTATATGAAAGATACATTGGCAGCTTACCGAACAGCTGCTGATGCAGCAGCGCGCATACAAACTGCATTCCGTGAGAATTCTTTAAAGCAAAGGACTCAAGCAATTGAATTCTCCACCCCTGAAGATGAAGCACGTGGTATTGTTGCAGCCATGAAGATTCAACATGCTTACCGCAACTTTGAGTCACGAAAAAGAATGGCAGCTGCAGCTCGTATTCAATACAGATTCCGCACTTGGAAGATCCGCAAAGAGTTCCTTAATATGCGTCGTCATGCTATTAGGATTCAAGCTGCATTTAGAGGCTTCCAAATGCGGAGGCAGTATCGCAAGATTTTATGGTCGGTAGGTGTAATCGATAAAGCCATACTGCGCTGGCGTCTTAAGAGAAAAGGTTTTCGTGGGCTTCAAGTTGCACCTGCTGAAGTGACAGAACAGCAGGAAATTGGCGTAGAAGAGGACTTCTACCACGTGTCCCAAAAACAAGCAGAAGAGCGAGTAGAGAAAGCTGTTGTACGGGTTCAGGCTCTGTTTCGATCAAAGAAAGCTCAAGAGGAGTATCGAAGGATGAAGTTAACCTACAATGAAGCAGCGCTGGAATATGAAGAACTTTCACATCCTGATATGAATTTGAGTAGCTGA 2757 41.89 MSLAMKADVQGSLVGSEIHGFHTLQELDVTNIREEASGRWLRPNEIHAILCNYKYFVIHVKPVNLPTSGTIVLFNRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNVERIHVYYAHGLDNTTFVRRCYWLLDKTLEHIVLVHYRETQEVNFSPMHLQLQSSPSMSMNSNSGSVSDPSTPCLLSEELDSRDNHGYSIDKNERSEPRDTTTAMNHEQRLHEINTLEWDELLVTDEPFKPSIPKGDRFSYFDQRSQVPTNVANNLLGNTPLFNNPVEPIGSAYMPLTSGQTNLNVESKESIPITSLDNLLNDGLLQSQDSFGRWINEVITESPDTVDPAIEPSISSIHNSFTDPTLNHCQSSVMEQIFNITDISPAWAFSTEKTKILIAGYFHNEYLHLANSNILVVCGNASVNADLIQPGVYRCVVQPHSTGLVNLFVSLDGHKPISQVLNFEYRAPLLREPVVASEQIQKWEEFQVQMRLAHLLFSTSRSLSIMSTKLSPTSLNEARKFAVKTSDISDSWIYLLNSIKENNTPFPQARDGVLEIILKSRLREWLIERVAEGSKKSTDFDIKGQGVIHLCAILGYTWAIHLFAWSGLSINFRDKFGWTSLHWAAYYGREKMVAVLLSVGAKPNLVTDPSSKNPLGYTAADLASLNGYDGLAAYLSEKALVSHFNDMSLAGNVRGSLETSTMTDVTNSDSISEEQMYMKDTLAAYRTAADAAARIQTAFRENSLKQRTQAIEFSTPEDEARGIVAAMKIQHAYRNFESRKRMAAAARIQYRFRTWKIRKEFLNMRRHAIRIQAAFRGFQMRRQYRKILWSVGVIDKAILRWRLKRKGFRGLQVAPAEVTEQQEIGVEEDFYHVSQKQAEERVEKAVVRVQALFRSKKAQEEYRRMKLTYNEAALEYEELSHPDMNLSS 918
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7669377 7679158 + Carg18878-RA Car08g01136 153710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01136 918 ProSiteProfiles Ankyrin repeat region circular profile. 606 634 - -
Car08g01136 918 ProSiteProfiles Ankyrin repeat profile. 606 638 IPR002110 GO:0005515
Car08g01136 918 ProSiteProfiles IQ motif profile. 794 818 IPR000048 GO:0005515
Car08g01136 918 ProSiteProfiles IQ motif profile. 771 797 IPR000048 GO:0005515
Car08g01136 918 ProSiteProfiles CG-1 DNA-binding domain profile. 29 155 IPR005559 GO:0003677
Car08g01136 918 Pfam IPT/TIG domain 370 455 IPR002909 -
Car08g01136 918 Pfam IQ calmodulin-binding motif 795 815 IPR000048 GO:0005515
Car08g01136 918 Pfam Ankyrin repeats (3 copies) 555 635 IPR002110 GO:0005515
Car08g01136 918 ProSiteProfiles IQ motif profile. 873 901 IPR000048 GO:0005515
Car08g01136 918 Coils Coil 885 905 - -
Car08g01136 918 MobiDBLite consensus disorder prediction 192 214 - -
Car08g01136 918 Pfam CG-1 domain 36 148 IPR005559 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01136 Car17g00331 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01136 Car-Chr8:7669377 Car16g00743 Car-Chr16:4680164 2.33E-128 dispersed
Car17g00331 Car-Chr17:2072407 Car08g01136 Car-Chr8:7669377 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4021 PF03859 CG-1 2.10E-44 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01136 K21596 - csv:101211298 1424.07