Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01149 ATGCTCCGGGGATTGATGAATCTGCTCTCTCTTTGTTGGAAGCCATTCGGGCGTGGTGGTGAAAATTTGAGCTCTGTTGGAGTCATTGGAACCAATTGCGGTGGCAAAGATTCTAAGGATAGCTTACTCTGGTTCTATGATTATGGCAAGTATGCTTCCGGTGATTTTTCCATGGCCGTCGTTCAGGCCAACCAGGTGCTTGAGGACCAGAGCCAGATTGAATCTGGTCCTTTTGGTACCTTCGTCGGAATCTACGATGGCCACGGCGGCCCCGACGCCGCTCGATATGTCTGCAACAACTTGTTTAGGCGTTTTCGGGATGAAGAACAAGGAGTTGTGACTCGTGAAACCATCCTGGAGGCATTTCGTCGAACAGAGGAAGGGTTTACAACCGTCGTGTCAGAGTTGTGGAGTACTCAACCCGAGATAGCAACAGTTGGGACGTGCTGTCTAGTAGGGGTGATACATGAGCAGACACTCTACGTGGCGAGTCTTGGAGATTCTCGTGCTGTGTTAGGGAGGAAAGTTGGCAACACTGGAGAGATTGCTGCCATTCAGTTATCAACGGAGCATAATGCAAATCTTGAGGATATAAGGCATGAATTAAGAGATATGCATCCAAACGACCCTCAAATTGTGTTTCAAAGGCGCGGAGTTTGGAGAGTGAAAGGCATTATACAGGTTTCTAGGTCCATTGGGGATGTCTATATGAAACATTCTCGGTATAATACTGACAGAATCAATGCTAAATTTAGACTTCCTGAACCGATGAATATGCCTATAATGACTGCAGTACCCACGATTCTTGCTCACCCTCTTCATCAAAACGATTCTTTTCTTATTTTTGCATCCGATGGACTTTGGGAACACCTAACCAATGAAAAGGCTGTGGATATTGTCCACAATCATCCTCGTGCAGGAAGTGCAAAAAGGCTTGTGAAGGCAGCCCTTCAAGAAGCAGCTAGAAAACGAGAGATGCGGTATTCAGATCTTCGAAAGATCGACAAGAAGGTTCGGCGTCATTTTCACGATGACATTAGTGTTGTTGTTTTATTTTTCAACCACGACCTTATATCCCGAAACCATACCCTCCTAGATCAGCCATTATCAGTCCAAAGTGCCTTCGATCATTGA 1134 45.86 MLRGLMNLLSLCWKPFGRGGENLSSVGVIGTNCGGKDSKDSLLWFYDYGKYASGDFSMAVVQANQVLEDQSQIESGPFGTFVGIYDGHGGPDAARYVCNNLFRRFRDEEQGVVTRETILEAFRRTEEGFTTVVSELWSTQPEIATVGTCCLVGVIHEQTLYVASLGDSRAVLGRKVGNTGEIAAIQLSTEHNANLEDIRHELRDMHPNDPQIVFQRRGVWRVKGIIQVSRSIGDVYMKHSRYNTDRINAKFRLPEPMNMPIMTAVPTILAHPLHQNDSFLIFASDGLWEHLTNEKAVDIVHNHPRAGSAKRLVKAALQEAARKREMRYSDLRKIDKKVRRHFHDDISVVVLFFNHDLISRNHTLLDQPLSVQSAFDH 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7731068 7733875 + Carg18891-RA Car08g01149 153723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01149 377 Pfam Protein phosphatase 2C 80 323 IPR001932 -
Car08g01149 377 ProSitePatterns PPM-type phosphatase domain signature. 81 89 IPR000222 GO:0043169
Car08g01149 377 ProSiteProfiles PPM-type phosphatase domain profile. 55 353 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car08g01149 Car17g00347 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01149 Car-Chr8:7731068 Car07g00667 Car-Chr7:3388579 3.72E-154 dispersed
Car17g00347 Car-Chr17:2171435 Car08g01149 Car-Chr8:7731068 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01149 K01102 - csv:101207284 693.345