Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car08g01155 ATGGCCAACTATCTCGCCTTCCATCTTTGCCTAATAATGTTCGAGCTTATTGCAATCACTTCGGCGAACATGAAAGCATCATACGGAGGAGGGGATGAGAACCAGATGCCCTTCGGCACGCCCCCTTTCTGCCCCGAGGCAGAATCCATAATCTTCTATTGGGTCAAAACTGCCATTGCCGAGGACCCTCGAATGGCGGCGTCTCTGCTTCGACTCCATTTCCATGACTGCTTTGTCAATGGGTGCGATGCTTCAGTGTTGTTGGACGATAACGACAACTTTGTCGGTGAAAAAACTGCAGCTCCAAATGCGAACTCGCTCAGAGGGTTCGAAGTGATTGATGCCATAAAATCCGAGATCGAATCTGTTTGTCCACAGACAGTTTCATGTGCTGACATTCTTGCAATTGCAGCCCGAGACTCCGTCGTTCTTTCTGGAGGACCTGTGTGGAAAGTGGAATTTGGAAGAGGAGACAGCCTGAGCGCCAGCAAAACAGCAGCACAAAACAACATTCCTGCGCCTAACTCCACTGTGGCCACTCTAGTTTCCAAGTTCCAGAACCTTGGCCTTTCTCTCAGAGATATGGTTGCTCTCTCAGGGGCGCACACGCTGGGACTAGCACGATGTGTTTCATTCAGTTCTAGGCTGCAGAATAACGGGAACAGCCCTAACGAAGGAGCAAACCAAGAGTTCATCGAGTCACTAAAACAGCTCTGCTCAGAATCTGGTAACACCTCGACACTGGCACATCTCGACCTTGTAACCCCAGTCATGTTCGACAACCAGTATTACATCAATCTTCTCACTGGAGAAGGGTTGCTCCAGTCTGATCAAGTTCTTGTAACTAGTGATCACCAAACTAGAGAAATAGTAGAAACTTATGCTGTGGACCCGATTGCTTTCTTTGAAGACTTCAAGCAGTCAATGGTGAAAATGGGAAGCCTCAAACCACCCGTTGGAACACAGACCGTGATCCGAACTAACTGTCGTACTCCGAGCTAA 1002 48.6 MANYLAFHLCLIMFELIAITSANMKASYGGGDENQMPFGTPPFCPEAESIIFYWVKTAIAEDPRMAASLLRLHFHDCFVNGCDASVLLDDNDNFVGEKTAAPNANSLRGFEVIDAIKSEIESVCPQTVSCADILAIAARDSVVLSGGPVWKVEFGRGDSLSASKTAAQNNIPAPNSTVATLVSKFQNLGLSLRDMVALSGAHTLGLARCVSFSSRLQNNGNSPNEGANQEFIESLKQLCSESGNTSTLAHLDLVTPVMFDNQYYINLLTGEGLLQSDQVLVTSDHQTREIVETYAVDPIAFFEDFKQSMVKMGSLKPPVGTQTVIRTNCRTPS 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 7755681 7758086 - Carg18897-RA Car08g01155 153729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car08g01155 333 ProSiteProfiles Plant heme peroxidase family profile. 33 333 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 SUPERFAMILY Heme-dependent peroxidases 43 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PANTHER PEROXIDASE 72-RELATED 41 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 Pfam Peroxidase 55 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 Gene3D - 44 330 - -
Car08g01155 333 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car08g01155 333 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Car08g01155 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Car08g01155 333 CDD secretory_peroxidase 44 330 IPR033905 GO:0004601|GO:0042744
Car08g01155 333 Gene3D Peroxidase, domain 2 172 313 - -
Car08g01155 333 PANTHER PEROXIDASE 40 41 330 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g01155 Car-Chr8:7755681 Car19g00328 Car-Chr19:5167788 1.34E-97 dispersed
Car08g01155 Car-Chr8:7755681 Car16g00669 Car-Chr16:4236763 2.19E-113 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car08g01155 K00430 - csv:101205763 575.859