Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00012 ATGGCGCTATTTCAGCCACACACTTCACCTTCTGCAATTTCATCTTCCTCCGCCTCATTCTATGGGAGTTCTCTTCAACAACTCCGTTCACGCACCATAGCCCTCAATCTTCGAAACAGCCCCTCCATCCCTCATCGTTTCACTTGCACAGCTTCATGGCAGGAGCTTGCGGGGGTTTTGATATTCTCCGCAATTCCTTTCACGGCCGTGAAAGCCATCGCCAATAGCCCATTCGGAGAGTCGCTCCAGAGGCAATTGGAAAAGAAGAAAAATGCTGCCGTCGCCAAGTCTTCGAAGTTCAAGGCTCTTGCTGAGCAGGCTAGAAAAGATAGCTCGTGGTATGGAGAAAAGCGTCCTCGCTGGCTTGGTCCACTACCATACAATTATCCAAAATATCTGACAGGTGAACTGCCGGGTGATTATGGATTTGATATTGCAGGTCTGAGTGAGGATCCAGTGGCTTTTCGGAAGTACTTCAACTTTGAAATACTGCATGCTCGTTGGGCTATGTTAGCGTCCCTTGGTGCTTTAGTTCCAGAGATCTTAGATATTTTTGGAGCTTTTCATTTCACTGAACCCATCTGGTGGCGAGTGGGATATTCAAAACTTAAGGGAGATACACTCGACTATCTTGGAATTCCAGGGCTTCATTTAGCTGGAAGCCAAGGAGTGATCGTCATTGCAATTTGCCAAGCTATTTTGATGCAATCTCCCTTTGTGATCGTCTTTCGGAGTTTTGAGTCTTTTTTATACAAAACGATGGCTGACATGGATGTGCTCGCCGACTTCTCTGAGGTTAACGAGAAATGTACCTTGGATATGAGTACCTACGAGAATTTGCTTAAAGCCTGCAATGCAGAACCCCTTGACTGTGCTACTGCAATTCCTAAGGATGATACGGACGGTTCTTACGTTTTCGTTAGCTCCAACGATGCTGCAACTTCCAATGATCACGTTGCTTCCGATGTCAATGGGCAAGCAAAGTGTTCCCAGAATGTTGATACGGAGATTAAGGTTCGTGATGGGGAATTTAGTACTGACGACGGTAGAAAACCTGAACCGATTTTCGTTTCTGATGCACTGGGGGATTCCCAATTCAGTTTTTCTGAGCATATGAATGAGAGTGACGCAATTCTGGATGAGATCAGAGTGGCGGATGTCCTTCAATCTTCTGACGCCAAGGAGGATGAAGCGGAACCTCAACTGAATTTTTCTCCAACGGTGGAAGAAACTCGAATCCCGGAGGGCCAGGCTACCAACGAATCTTTTGATGCAGTGACAAATTCCGGCGAAATCCATGGGGTAGAGTCTCCTCATGAAACTGAAGACATTCACATTCAGGAGGAAAATCAAATAATTTCTACCCCTGGATCTTCTAACCCCGATTCAAATCGTAGTGGAGAAGTCAAGGTGGAGTCTTCTCAAATGGCGGAAGATATTCAAATTCATGAGGATAATGGAATAGTGGAAATCATGAAGTCTTCTGATACCGAAGAAAATCATGTGATAGGCATTGAGGCGGAGTCTTCTCAGAAAGCAGACAGTATCCAGATTCACAAGGAAAATGGAACGGTTGCAATCATGCCTTCTGATACTGAGTCAAACCCTGGGGAAGAAACCGAGGTAGAGTCATCTCTAAAGGCAGACGACACTCAGAATCACGAGGGAAATGGCATAGTGAAAGCCTTTGATTTGTCTAATACCGAGACAAATCCTAGGTCAGAACTCGAGGAGGAATCTTCTCGGGAGGTGGAGGACATTGAGCTTAGGGGGCAAAATGAAATAGTCGACACCAACAAATCGTCTGCTTCCATGGAAAAGCGCGGGGAAGAAGGTGAAGTAATTCCCGAGGATAATGACACAGTGGTTATCAATGAATTGTCTGATACCATACCTAACCGCAGTGAAGAAACTGAGATGGAATCTTTTGAGAGAGAGGAAAGCATTCGAGAATCACAAAATGCAACGATGGAGGCTGCTGACTGCAATTTTGTTAATGTCCAAGAGAAGGCTGATGAGATGGTAAGTAAAGCTGTGGTAAGCGATTCTGTAGGAGGAATAGGAGAATCTCAAATTATAAGTTTGGGTGCTGCTAAATCCGAGGTAGATCATCTTGATGATTCCGTGGAAGACGTTAAAGGGGAATGTAAACAAGGGGTTGCATTGAATGAAGAGAACCCTGAGAGCACTCAAATTACAATTAGTCAGGATGGCGAACGCTTCCAGGTTGCTGGTGAGGAACAAGAAAGTTTAAATAAGGAACTTTCTCTTTTAGAGCCCTCCGAAGAAAACAAAGCGGACATGGAGCAGGATTTGGAAGCAACTCCTAGTCCATTGGTCTGTCCAGAAGACATAAATGGTTCTATGCCCATTAGGACGGATGATGGCTTGCCAACTAGTATGGATCAAGATGACCCCTTGGAGGCTATTGATGACAAAGACACTATAGTTAACAGGACCAGCTTCCATGACCTTACTGAATCCTCACCTGGCTCTGTAGATTATGATATTGCTACTGATGAAACTCATATATTATCTCCTACGATGTTTATTAGTGATCCAAGAGTAGAGTTAAATGAGATTACCGTGAATGAACAAGTGGTGAATCATGTGTTCGAACTGGAAGAGAATTCAGAGACGGTTTCTCAACCTAAGGTGGACGAATGTATCAAGGTTGGAGATTTGGAATGTACAGTCTCTGGAAATGGAGATGATATGCCCACTGCACTCGACCAATCTAGAATTGCTTGTGGTGACATCTCTGTTGCTGGCAGTCAATTAATCCCTGAGGACATTGAGCGAGTGGAAAGCATTGAAACAGCAGTATCTATTGTTGTGATAGGAAATACTAAGATTGAAATAAGGGAAACGCCCTCTGTGAACTGTCTTAATGATCCATTCCTGAGATCCGATCTTCGCGTTGAGCATTGTACAATGTCTGAAAATGTGGCCTCTGCTGGTGATGATGTCCTACCGGATCAGGAAATCAGTGAAAATCATGAGGATGACCTTCTTGGTAACTCTAATTTTGAGATCAAGTGTGAGAACGGTCACATCGAAAAAGATGACCAATCAACTTTCCACAGTAATGATATGAGATCAAAATCTAAGGATTGTACTTCAATTGAAAGTGAAGAGAGAGGTTCCACTGTTCCTCAAGTTCCTAATGGTGTCGTTAAATCTCCTGAAATTCCACAAAGTTCTGCTGTTGAAACAGGCTCGGAATTGCATGATAACAAAAGTAGCTCAAGTCCAACTGCTAATGAGAATTCAGTGGATGACATCGAGATTACATCTTCCATAGGAGGTGGTAGCAGAACTATACCTGGCGATGATTGCAGTGTGTCAAAAACTGAAGTTCTCAAGCGTTCCATGATAAAAGATGAAGGGAGTCTGAACTCAATCTCTGATGTTGTCTTTGAAACTGACGGTAAACTGACGAAAGATGAAACTGAGGTCATTCATGAGGATTGCCAGAATGAACCTTCACCTGTTTCTCCAGAAGGTTCTGCTGATGCTTTAACGGGGCAAAATGTAGGGGCTGAGGCAGGAACAAGGCCGTTTAACTTTTTGGTTAAGGTACCTAGATTTGATGATCAAAATATAAGAGAGCAGATTAAGTGTGCTCAGACAGAAGTTGATCGGAAGACCAAGGATCGGGATGCCATTCGGGTTCAAATACAGACAATGAGGGCTGCATGTAAAGTGTTGAGTGATAATCTTGAAGCAGCAATGTCGGAAGGAAGAGCTGCAAGAGACTTGCTGAAGTCAAAAAGACTGGAGATAGACTCTGTTCAGTCAGTGATAACAAAAGTGAAGAATGCAATGTCCGTTGAGGATATCGATGGCAGGATACGCAACACTGAACACATGATAGAGCATGAAACGCTGCCACTAAAAGAGGAAAAGCAATTACTTCGTGAAATCAAGCAATTGAAGCAGCAGCGGGAACAGCTTTCATCAACTATGGGTAAGCAGGAAGAGCTTCAACAGGCACTGGACCAGAGAGACCAGATTGAAGAACGCCTAAAGCTATTAAGAAAGGAGATGGATTTACTGAGGGGCAATGTTTTGAAAGCCGAATCAGTAATAAAGGTTGCTAAGAAGAAATATAATGATGAAAGCATAAAGCTGGACGAGTTGCAATCCCAGTTTAAAGCAGCAGATGAGATTCGCCAAGAAGCATATGCTAATTTACAGAGTACGAGGAAGCAATTGTCTGAGAAGAACAAATACTGCTGGAATTATCGGAAGGACGCAAAGGAAGCCAATGAAATAGCATTGAGTGGAGATCTAGAGAGACTGCAACGTTTGTGTGTTAATCAGGTAGAGCGCATGATGGAACTGTGGAACACAAATGCCGAGTTCAGGGAAGAATATATTAAGAGCAACATGAGGAGTACCCTGTGGCGACTAAAGACGTTGGATGGCCGCTCCCTTGGCCCCAATGAAGAGCCGCATGTACCGAACCGTATTGTAAAGGAGAGACCAGCGAAGGACAATTCTCCTTTAACGGTTTCAACAATGCAGGAAACAGAAAAATTGATACCCGCTGCTGATGCTGATGATGCGAGAGACAATGACAAATCAGTGACGAAAGTAGCCGAAACGAAGAATCGAACTACAAAAAAGAAGCCCGAAACAGTTGTGGCCTTAGAGAGTGGCCCCAGAAATATCTCTAGCGAGAATGAGGTAGAAGAGCCACCGCGACCAGTGGAGATTAAGCGAACAAGAGAGGAAGAGGAGCTGGCGGCGAAAGCAGAAGAGTTGAGAAAGGAAGAGGAAGCAATCAAGTTGAAGGAACGACGTAAGTTGGAAGAGAAGGCCAAAGCCAAAGAGGCGTTGGAGAGGAAAAGAAGAAATGCCGAGAAAGCTCAGGCCAGGGCGGCAATTAAAGCACGGAAAGAGGCGGAAGAGAAAGAGAAGCTAAGGGAGAAGAGAGCAAAAAAGAAGGAAAGGAAGATGGCAGCTGGGACGGAAGCTGGGAATGGTCGGGATGAAATGGAATGTGCTATAGTCACCGAGACCCCAGCAGCAGAAGGTCCGAAGGAGGAGTCCGAAAACAGAGGTAATCAGGGGACAGCAGCGAAGAGGCGGCCTAAAAAAGCATCGCAGTACAGAAAGCAGAGCAAGACAAACTCAATGCCTCCGCCACTTCGAAACCGGGGTAAGAGGAGGATGCAACCATGGATGTGGATTCTTCTGACAACCCTGGTTGTATTGGCGCTGTTCTTTGTCGGACAACAACAGCTTCTCTACTAG 5262 44.64 MALFQPHTSPSAISSSSASFYGSSLQQLRSRTIALNLRNSPSIPHRFTCTASWQELAGVLIFSAIPFTAVKAIANSPFGESLQRQLEKKKNAAVAKSSKFKALAEQARKDSSWYGEKRPRWLGPLPYNYPKYLTGELPGDYGFDIAGLSEDPVAFRKYFNFEILHARWAMLASLGALVPEILDIFGAFHFTEPIWWRVGYSKLKGDTLDYLGIPGLHLAGSQGVIVIAICQAILMQSPFVIVFRSFESFLYKTMADMDVLADFSEVNEKCTLDMSTYENLLKACNAEPLDCATAIPKDDTDGSYVFVSSNDAATSNDHVASDVNGQAKCSQNVDTEIKVRDGEFSTDDGRKPEPIFVSDALGDSQFSFSEHMNESDAILDEIRVADVLQSSDAKEDEAEPQLNFSPTVEETRIPEGQATNESFDAVTNSGEIHGVESPHETEDIHIQEENQIISTPGSSNPDSNRSGEVKVESSQMAEDIQIHEDNGIVEIMKSSDTEENHVIGIEAESSQKADSIQIHKENGTVAIMPSDTESNPGEETEVESSLKADDTQNHEGNGIVKAFDLSNTETNPRSELEEESSREVEDIELRGQNEIVDTNKSSASMEKRGEEGEVIPEDNDTVVINELSDTIPNRSEETEMESFEREESIRESQNATMEAADCNFVNVQEKADEMVSKAVVSDSVGGIGESQIISLGAAKSEVDHLDDSVEDVKGECKQGVALNEENPESTQITISQDGERFQVAGEEQESLNKELSLLEPSEENKADMEQDLEATPSPLVCPEDINGSMPIRTDDGLPTSMDQDDPLEAIDDKDTIVNRTSFHDLTESSPGSVDYDIATDETHILSPTMFISDPRVELNEITVNEQVVNHVFELEENSETVSQPKVDECIKVGDLECTVSGNGDDMPTALDQSRIACGDISVAGSQLIPEDIERVESIETAVSIVVIGNTKIEIRETPSVNCLNDPFLRSDLRVEHCTMSENVASAGDDVLPDQEISENHEDDLLGNSNFEIKCENGHIEKDDQSTFHSNDMRSKSKDCTSIESEERGSTVPQVPNGVVKSPEIPQSSAVETGSELHDNKSSSSPTANENSVDDIEITSSIGGGSRTIPGDDCSVSKTEVLKRSMIKDEGSLNSISDVVFETDGKLTKDETEVIHEDCQNEPSPVSPEGSADALTGQNVGAEAGTRPFNFLVKVPRFDDQNIREQIKCAQTEVDRKTKDRDAIRVQIQTMRAACKVLSDNLEAAMSEGRAARDLLKSKRLEIDSVQSVITKVKNAMSVEDIDGRIRNTEHMIEHETLPLKEEKQLLREIKQLKQQREQLSSTMGKQEELQQALDQRDQIEERLKLLRKEMDLLRGNVLKAESVIKVAKKKYNDESIKLDELQSQFKAADEIRQEAYANLQSTRKQLSEKNKYCWNYRKDAKEANEIALSGDLERLQRLCVNQVERMMELWNTNAEFREEYIKSNMRSTLWRLKTLDGRSLGPNEEPHVPNRIVKERPAKDNSPLTVSTMQETEKLIPAADADDARDNDKSVTKVAETKNRTTKKKPETVVALESGPRNISSENEVEEPPRPVEIKRTREEEELAAKAEELRKEEEAIKLKERRKLEEKAKAKEALERKRRNAEKAQARAAIKARKEAEEKEKLREKRAKKKERKMAAGTEAGNGRDEMECAIVTETPAAEGPKEESENRGNQGTAAKRRPKKASQYRKQSKTNSMPPPLRNRGKRRMQPWMWILLTTLVVLALFFVGQQQLLY 1753
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 69627 82837 - Carg08595-RA Car09g00012 153749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00012 1753 Pfam Chlorophyll A-B binding protein 130 230 IPR022796 -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1045 1105 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1021 1113 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1601 1660 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 527 586 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1021 1044 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1563 1579 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 571 586 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1680 1694 - -
Car09g00012 1753 Coils Coil 1576 1660 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1520 1547 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1520 1579 - -
Car09g00012 1753 Coils Coil 1364 1398 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 757 783 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 452 476 - -
Car09g00012 1753 Coils Coil 1299 1356 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 1601 1723 - -
Car09g00012 1753 Coils Coil 1227 1247 - -
Car09g00012 1753 MobiDBLite consensus disorder prediction 452 471 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01034 Car-Chr1:9801427 Car09g00012 Car-Chr9:69627 1.05E-40 dispersed
Car09g00012 Car-Chr9:69627 Car09g00775 Car-Chr9:4569314 1.57E-30 dispersed
Car09g01065 Car-Chr9:9490047 Car09g00012 Car-Chr9:69627 4.83E-08 dispersed
Car09g00012 Car-Chr9:69627 Car01g01616 Car-Chr1:13252764 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00012 - - csv:101219495 1852.41