Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00019 | ATGGGATATGGGCTATGGATTGAGATTGATTACATAAGTACAGAAGAGCTTGCAAGGAGACGGAAAAGATGGGAAGGCGTTTTAATTGAAATCGTTTTCCGAGGTTTGGTAAGTGATAGTGTATGGATCCATCGCCTCCAGGAAATCGTTTCTTCCAGTGTATCGGAGTGGATACCTAATCGATTTGACAAAATTATTCGGTTGTTGTTGGATCCGATGGGTGGTCCGAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCCATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCACCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACAGGCACTGTGCTTCCCCCGCCAGCTCCCCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCAGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAGAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCGAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCATTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGAAGTGGGGAGTGCCACAAAGCCTCGTCAGTTCTAATGTTTAATTAA | 861 | 55.05 | MGYGLWIEIDYISTEELARRRKRWEGVLIEIVFRGLVSDSVWIHRLQEIVSSSVSEWIPNRFDKIIRLLLDPMGGPNVLGSHVLEVSASADIVHSLSNYARRRGRGLSILCGTGTVANVTLRHPSASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGQVILMAASFSNAVFERLPLEEEEEGGVQVQPTASQSSGVTGGGQMGEGGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSGSGSGECHKASSVLMFN | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 111175 | 113549 | + | Carg08602-RA | Car09g00019 | 153756 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00019 | 286 | ProSiteProfiles | PPC domain profile profile. | 76 | 216 | IPR005175 | - | |
| Car09g00019 | 286 | MobiDBLite | consensus disorder prediction | 212 | 226 | - | - | |
| Car09g00019 | 286 | MobiDBLite | consensus disorder prediction | 206 | 241 | - | - | |
| Car09g00019 | 286 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 82 | 195 | IPR005175 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00019 | Car-Chr9:111175 | Car06g00967 | Car-Chr6:7419418 | 1.02E-47 | dispersed | |
| Car09g00019 | Car-Chr9:111175 | Car15g00111 | Car-Chr15:651206 | 2.84E-48 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00019 | - | - | cpep:111779195 | 284.648 |