Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car09g00029 | ATGCGTCCCTTCAGGTACCTCGCCGGTGTGAACTCCTCCGCCATCTCCGACTCGGCTGAGCCCCAGACATATGACTCTGACTTCGTCATAATCCTAGCTGCCCTCCTCTGTGCCTTGATATGCGTTCTCGGTCTCGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCACCTAGCCGGCAATGTCGGCGGCGGCGCTTCCACTCGTCCTCCTCCTCCTCCTGCGTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACAACTTCACAGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCAGTCGGTGATGAAATCCGGGTGCTGCCGCAGTGCGGCCATGGATTTCACGTGTCCTGCATCGATATGTGGTTCCGATCTCACTCTTCATGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCAAGCTCGAGTTCGAACGGTGGGACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAGTAGATTCTTACCTTAG | 561 | 55.79 | MRPFRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVGGGASTRPPPPPASNKGLKKKILRSLPKYNFTAEFSAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTSRFLP | 186 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 146924 | 147484 | - | Carg08612-RA | Car09g00029 | 153766 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car09g00029 | 186 | Pfam | Ring finger domain | 102 | 145 | IPR001841 | - | |
Car09g00029 | 186 | MobiDBLite | consensus disorder prediction | 160 | 186 | - | - | |
Car09g00029 | 186 | MobiDBLite | consensus disorder prediction | 171 | 186 | - | - | |
Car09g00029 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 103 | 145 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car03g00630 | Car-Chr3:5735002 | Car09g00029 | Car-Chr9:146924 | 5.57E-15 | dispersed | |
Car09g00029 | Car-Chr9:146924 | Car15g00176 | Car-Chr15:941800 | 3.46E-38 | dispersed | |
Car06g00141 | Car-Chr6:871727 | Car09g00029 | Car-Chr9:146924 | 1.65E-61 | transposed | |
Car01g01599 | Car-Chr1:13188869 | Car09g00029 | Car-Chr9:146924 | 2.47E-124 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car09g00029 | - | - | csv:101207021 | 342.043 |