Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00029 ATGCGTCCCTTCAGGTACCTCGCCGGTGTGAACTCCTCCGCCATCTCCGACTCGGCTGAGCCCCAGACATATGACTCTGACTTCGTCATAATCCTAGCTGCCCTCCTCTGTGCCTTGATATGCGTTCTCGGTCTCGTTGCTGTTGCCCGCTGCGCCTGGCTACGCCACCTAGCCGGCAATGTCGGCGGCGGCGCTTCCACTCGTCCTCCTCCTCCTCCTGCGTCCAACAAAGGTCTCAAGAAGAAGATCCTGAGGTCTCTTCCGAAGTACAACTTCACAGCTGAGTTTTCTGCTCAGTTCTCAGATTGCGCGATCTGCCTCGCGGAGTTCGCAGTCGGTGATGAAATCCGGGTGCTGCCGCAGTGCGGCCATGGATTTCACGTGTCCTGCATCGATATGTGGTTCCGATCTCACTCTTCATGTCCTTCGTGCCGTCAGATTCTTGTGGTAAGTCAGTGCCAGAAGTGCGGCGGTTTTCCGGCAAGCTCGAGTTCGAACGGTGGGACGGAATCCAGAGTGAAAGAGGAAGGAGATGATAAGACGAGTAGATTCTTACCTTAG 561 55.79 MRPFRYLAGVNSSAISDSAEPQTYDSDFVIILAALLCALICVLGLVAVARCAWLRHLAGNVGGGASTRPPPPPASNKGLKKKILRSLPKYNFTAEFSAQFSDCAICLAEFAVGDEIRVLPQCGHGFHVSCIDMWFRSHSSCPSCRQILVVSQCQKCGGFPASSSSNGGTESRVKEEGDDKTSRFLP 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 146924 147484 - Carg08612-RA Car09g00029 153766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00029 186 Pfam Ring finger domain 102 145 IPR001841 -
Car09g00029 186 MobiDBLite consensus disorder prediction 160 186 - -
Car09g00029 186 MobiDBLite consensus disorder prediction 171 186 - -
Car09g00029 186 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g00630 Car-Chr3:5735002 Car09g00029 Car-Chr9:146924 5.57E-15 dispersed
Car09g00029 Car-Chr9:146924 Car15g00176 Car-Chr15:941800 3.46E-38 dispersed
Car06g00141 Car-Chr6:871727 Car09g00029 Car-Chr9:146924 1.65E-61 transposed
Car01g01599 Car-Chr1:13188869 Car09g00029 Car-Chr9:146924 2.47E-124 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00029 - - csv:101207021 342.043