Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00032 ATGAGTTTCTTTTTGCTTCTTTCTTTGCTATCTCTCTGTTGTGGTAGTTTTTCTCTCGAATTTGGTAAGAACAGTTCGTCAAGACCTTCGGTTGTGAACATTGGGGCTATTTTCTCTTTTGACTCCACCATTGGAAAAGTTGCTAAAATTGCCATTGAAGAAGCTGTTAAAGATGTGAATGCGGATCCCGGAATTCTTCCCGGAACCAAGCTTTGGTTACAAATGCAAAATTCCAACTGTAGTGGGTTTCTGGGCATGGTCGAAGTTTTGCAACTTATGGAGAATAAAACCGTAGCCATCATAGGTCCTCAGTCTTCTGTGGTTGCTCACATTTCATCCCAAGTTGCAACTGAGTTCCAAGTTCCTCTGGTCTCATTTTCAGCTACAGATCCTACTCTCTCTGCCCTTCAGTTTCCATTCTTCGTGAGGGCTGCGCAGAGTGATTTATTTCAAATGGCTGCAGTTGCTGAGATTGTTGATTATTATGGTTGGAAAGAGGTGATTGCTATATATGTGGATGATGATTATGGGTGGAACGGTATTGCAACATTGGGTGATAAACTTGCTGAGAAGCGTTGTAAAATCACATATAAGGTGGGTATTAGTCCAGAATCAGTGGTGACTCGAGCCCAAGTTTTGGATCAACTTGTTAAGGTTGCACTAATGGAATCAAGAGTTATGGTTCTCCATGTGAACCCCAAATTAGGCGCCTTAGTCTTTTCAGTGGCTAAATTCCTTCAAATGATGGGGAATGGATATGTATGGATAACAACTGATTGGCTTTCATCTCTACTAGATAGTGTTGTTCCTCTCCCTCTTGAGACCGTAGAGTCGATGCAAGGAGTTCTTTCTCTACGCCAGCACACAGCGGATTCAGATCAAAAGAAAGCTTTTCTTTCAAGGTGGAATAAGTTCACCGGTGGCTCTTTAGGTCTGAATGCATATGGTCTGTATGCTTATGACTCTGTTTGGGTGGTTGCTCATGCCATCCACAAATTTCTTAATCAAGGTGGGATCATCGCACATTCTGATGATTCCAGACTGCATTTAAATGAAAGCGGTAATCTTCATCTTGAAGCTATGACTATCTTTGATGGCGGAAAACGCCTGCTGGATAACATATTGGAGAGTGACTTTGTTGGTTTGAGCGGTGCCATTAAATTTGATTCTGACAGATCTCTTCCTCATCCTGCATATGATATTATTAATGTTATTGGGACTGGATCAAGAAGAGTGGGTTACTGGTCCAACTATTCTGGTCTATCAGTTGATTCTCCTGAGACACTCTATTCCAAACCACCTAATCGTTCAAGCGCAAATCAGAAGCTGTACGAGGTTATATGGCCAGGAAATACAATAGGTAAGCCTCGAGGATGGGTATTCCCAAACAATGGGAAGCTATTAAACATTGGAGTGCCACTTCGGGTCAGCTACAAGGAGTTTGTATCACAAATCAAAAGGACTGAAAATTTCCAAGGTTTCTGCATTGATGTGTTTACAGCTGCTGTAAGCTTATTACCCTACGCTGTCCCGCACCGATTCATAGCCTTTGGCGATGGCCATCATAATCCAAATTACACAGATCTTGTGTATGGGATCACAACTGGCAAATTTGATGCTGTTGTTGGGGACATTGCCATTGTCACGAGCCGTACAAGGCTTGTGGATTTTACTCTGCCATATACTGCTTCTGGACTAGTTGTGGTGGCTCCATTCCAAAAACTGAACACTGGTGCTTGGGCTTTCCTGCATCCATTTTCTCCAGCCATGTGGATGGTCACCGCTAGTTTCTTCCTTTTTATCGGAATTGTTATCTGGATTCTGGAGCATAGGACGAATGATGAATTCAGAGGTCCACCTAAAAAACAATGTATTACAATTCTATGGTTTAGCTTCTCAACTCTATTTTTTGCCCACAAGGAGAACACAATTAGCACTCTTGGCCGCCTAGTGCTGATCATATGGTTCTTTGTGGTTTTGATAATAAATTCTAGCTACACTGCCAGTTTAACATCCATTCTCACAGTGCAGCAGCTATATTCTCCAATCACAGGAATCGAAACCTTGACGAAAGGTGGCGAACCGATAGGCTTTCAAGTTGGATCGTTTGCTGAACGTTATCTGAGTGAGGAGCTGAACATATCTAAATCCAGGCTTTTTGCTCTTGGATCACCGGAAGAATATGCCAAGGCACTTGAGCTTGGCCCTGACAAGGGGGGTGTTGCTGCTATAGTTGACGAACGTCCATATGTAGAAAGTTTCCTGTCGAGACAGTGCACATTCAGAGTTGTTGGTCAAGAGTTTACAAAAAGTGGCTGGGGTTTCGCATTCCCCAGAGATTCTCCCTTGGCTGTAGACTTGTCGACGGCCATTTTGCAGCTCTCGGAGAATGGCGATCTTCAACGGATTCATGATAAATGGCTAATGAAAAGCGCCTGCAGCATGGACAGTGCAGAGCTAGAATCAGACCGGCTTCAACTTAAGAGCTTCTGGGGCCTGTTTCTAATATGTGGGATAGTCTGTTTCATTTCTCTTGCCATATACTGCTTTCAGATTATTCGTCAGCTATACCGTTCTGATGAGAAAGGATCTGATCTGTCCATCAGTAGTGGATCACATTCTAATCGTCTTCGACGAATTATATCATTGATGGATGAGAAAAAAGAACCTTCTAAAAGAGAAAGCAAACGAAGGAAAGTTGAGAAATTATCTGAAAATGATAGGCATGATGATCAGTTGGAGATCAATCCCTGA 2754 42.67 MSFFLLLSLLSLCCGSFSLEFGKNSSSRPSVVNIGAIFSFDSTIGKVAKIAIEEAVKDVNADPGILPGTKLWLQMQNSNCSGFLGMVEVLQLMENKTVAIIGPQSSVVAHISSQVATEFQVPLVSFSATDPTLSALQFPFFVRAAQSDLFQMAAVAEIVDYYGWKEVIAIYVDDDYGWNGIATLGDKLAEKRCKITYKVGISPESVVTRAQVLDQLVKVALMESRVMVLHVNPKLGALVFSVAKFLQMMGNGYVWITTDWLSSLLDSVVPLPLETVESMQGVLSLRQHTADSDQKKAFLSRWNKFTGGSLGLNAYGLYAYDSVWVVAHAIHKFLNQGGIIAHSDDSRLHLNESGNLHLEAMTIFDGGKRLLDNILESDFVGLSGAIKFDSDRSLPHPAYDIINVIGTGSRRVGYWSNYSGLSVDSPETLYSKPPNRSSANQKLYEVIWPGNTIGKPRGWVFPNNGKLLNIGVPLRVSYKEFVSQIKRTENFQGFCIDVFTAAVSLLPYAVPHRFIAFGDGHHNPNYTDLVYGITTGKFDAVVGDIAIVTSRTRLVDFTLPYTASGLVVVAPFQKLNTGAWAFLHPFSPAMWMVTASFFLFIGIVIWILEHRTNDEFRGPPKKQCITILWFSFSTLFFAHKENTISTLGRLVLIIWFFVVLIINSSYTASLTSILTVQQLYSPITGIETLTKGGEPIGFQVGSFAERYLSEELNISKSRLFALGSPEEYAKALELGPDKGGVAAIVDERPYVESFLSRQCTFRVVGQEFTKSGWGFAFPRDSPLAVDLSTAILQLSENGDLQRIHDKWLMKSACSMDSAELESDRLQLKSFWGLFLICGIVCFISLAIYCFQIIRQLYRSDEKGSDLSISSGSHSNRLRRIISLMDEKKEPSKRESKRRKVEKLSENDRHDDQLEINP 917
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 157713 160926 - Carg08615-RA Car09g00032 153769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00032 917 Pfam Receptor family ligand binding region 50 406 IPR001828 -
Car09g00032 917 Pfam Bacterial extracellular solute-binding proteins, family 3 490 808 IPR001638 -
Car09g00032 917 MobiDBLite consensus disorder prediction 882 917 - -
Car09g00032 917 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01595 Car09g00032 CCT
Car01g01595 Car09g00032 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00059 Car-Chr1:327791 Car09g00032 Car-Chr9:157713 7.11E-09 dispersed
Car02g00139 Car-Chr2:810503 Car09g00032 Car-Chr9:157713 0 dispersed
Car02g00895 Car-Chr2:6343694 Car09g00032 Car-Chr9:157713 1.51E-147 dispersed
Car09g00032 Car-Chr9:157713 Car20g00529 Car-Chr20:2910769 0 dispersed
Car01g01595 Car-Chr1:13172205 Car09g00032 Car-Chr9:157713 0 wgd
Car03g00575 Car-Chr3:5494318 Car09g00032 Car-Chr9:157713 0 wgd
Car07g00334 Car-Chr7:1677154 Car09g00032 Car-Chr9:157713 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00032 K05387 - csv:101204862 1585.85