Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00033 ATGGCCACGGGTTTAGATTTTTCACCTCCCTTCACCCTACTGGAAGGCGGCGGATACAATAAGGACAATGTATCAGCCACAGATGACGAAAGTTCTGATAGCTTTAATAGTTTGAAACAGATGACCAGTGGGAAGCCTCCCCGACACCTCTCAGTAATGCGGCATAGTGTGAGCTCCATAAAGCTCCTTGGTCAAGCTGACTTGAGCTTGGATGCAGAAACTCTTGGGAATAAGTCGCCTGATGGGAAAACAGGATTCTTACCTGTCTTGAGATCGGGTAGCTGTTCAGAAAAAGGACCTAAGCAGTACATGGAAGACGAACACATATGCATAGATGATCTTGTTGAACATATCCATGCTTGTGCAGATTTCACTTCTCCTGGAGCGTTCTATGGTGTGAGTATCACTTTTCACCTTGATAACATTTTGACCTGTACACTGCAACGTTCTTCTCTGTATCAGAAAGTGATTCTCTTGGATATTCTCTTTAACGTTGTATTTGGTGGAATTATTGTGTTGCAGGTATTTGATGGCCATGGGGGTACAGATGCCGCTGCTTTTGTTAGAAAGAACATCCTCAGATTCATTGTGGAGGACTCCTGTTTTCCAATTAGTGTAGAGAAGGCAATTAAGAGTGCTTTTTTGAAAGCTGATTATGCTTTTGCTGATGCTAGTTCTCTGGATATCTCCTCTGGCACTACTGCCCTAACTGCTTTCATTTTTGGAAGAACAATGATTATTGCGAATGCTGGGGATTGTCGTGCTGTTCTGGGTAGGAGGGGCAAGGCTATTGAGGTGTCGAAGGATCACAAGCCCAACTGTGCATCTGAAAAACTCAGAATTGAGAAGCTTGGTGGGGTGATATATGATGGCTATCTCAATGGCCAGTTATCTGTTGCGCGTGCTATAGGAGATTGGCACATGAAAGGTGCCAAGGGTTCTGCTTGCCCACTGAGTGCAGAGCCAGAGCTGCAGGAATTGAATCTGACGGAGGAAGATGAATTTCTAATAATGGGGTGCGATGGGCTTTGGGATGTTATGAGCAGTCAGTATGCTATTACAATGGCAAGGAAAGAGCTAATGCTACACAACGATCCAGAAAGATGTTCAAGAGAGCTGGTAAGGGAGGCGCTAAAGCGCAATACGTGCGATAATTTAACTGTTATTGTGGTCTGTTTTTCCACTGATCCGCCCCCTCGGATAGAAATACCTCCAACTCGAGTAAGGAGAAGCATATCATTAGAAGGGCTGAATTTGTTGAAAGGTGTACTGGACTGCAATTCATGA 1287 44.52 MATGLDFSPPFTLLEGGGYNKDNVSATDDESSDSFNSLKQMTSGKPPRHLSVMRHSVSSIKLLGQADLSLDAETLGNKSPDGKTGFLPVLRSGSCSEKGPKQYMEDEHICIDDLVEHIHACADFTSPGAFYGVSITFHLDNILTCTLQRSSLYQKVILLDILFNVVFGGIIVLQVFDGHGGTDAAAFVRKNILRFIVEDSCFPISVEKAIKSAFLKADYAFADASSLDISSGTTALTAFIFGRTMIIANAGDCRAVLGRRGKAIEVSKDHKPNCASEKLRIEKLGGVIYDGYLNGQLSVARAIGDWHMKGAKGSACPLSAEPELQELNLTEEDEFLIMGCDGLWDVMSSQYAITMARKELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSTDPPPRIEIPPTRVRRSISLEGLNLLKGVLDCNS 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 162494 166666 + Carg08616-RA Car09g00033 153770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00033 428 MobiDBLite consensus disorder prediction 18 49 - -
Car09g00033 428 Pfam Protein phosphatase 2C 172 385 IPR001932 -
Car09g00033 428 MobiDBLite consensus disorder prediction 29 44 - -
Car09g00033 428 ProSiteProfiles PPM-type phosphatase domain profile. 91 393 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01594 Car09g00033 CCT
Car01g01594 Car09g00033 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01168 Car-Chr5:11118947 Car09g00033 Car-Chr9:162494 2.55E-103 dispersed
Car08g01163 Car-Chr8:7791056 Car09g00033 Car-Chr9:162494 6.06E-89 dispersed
Car09g00033 Car-Chr9:162494 Car12g01132 Car-Chr12:11013834 4.46E-101 dispersed
Car11g00269 Car-Chr11:1476101 Car09g00033 Car-Chr9:162494 5.12E-29 transposed
Car01g01594 Car-Chr1:13166860 Car09g00033 Car-Chr9:162494 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4026 PF00481 PP2C 1.80E-68 CL0238 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00033 K14803 - csv:101205355 740.725