Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00039 ATGATGGAGTGGCAGAACCAGCAGCAGCAACAGAACCAAACTGAGCAATTGCAAATGCAAATGCAGGTGGAGCAATTGAGCAACGCCGCCGATGGAGTTGGTGGCCTCTACGTCAAGGTGATGACCGATGAGCAAATGGAACTCCTCAGGCAGCAGATCTCTGTCTATGCTTCCATCTGTGACCAACTTGTCGAGATGCATAAGGCAATCACCGCCCAGCAGGACCTTGCCGGAATGAGGCTTGGGAATCTTTACTGTGGTCCAATAATGGCTTGTGCTGCTGGTCACAAGATAACTGCTAGGCAGCGGTGGACGCCCACACCTGTGCAGCTTCAAATTCTTGAGCGGATTTTTGATGAGGGCAATGGGACCCCAAGCAAGCAGAAGATCAAGGATATAACTATACAGCTGATACAATATGGTCAAATTTCAGAAGCAAACGTTTATAATTGGTTTCAAAACAGGAGGGCTCGTTCAAAAAGAAAGCAAGCAAATTCAGTACCAAATAATGCAGACTCAGAACCAGAGACCGAAGTCGATTCTCCAAAGGAGAAAAAGACTAAACCAGAAACCTTCCAAGCTTATGAACATTTTGTTCCGAAGTTGAGCAACGTGTATTCTCAGAGATCTGAATTAGGTGCTGAAATCCTTTCCTTTGACACACAAACGAATAAAGGGGAGCCCATGTTTCAATCTTTTGGATCTGGTCATATCAGTCAGATGACCCCAACACAGAATCATAGAAATAATATGTCAAACGAAAAAATGAACGTACCGGACTATTCTCCTTACTCTCCTTGTGAAGGATATCACTTGGTTGAGTGA 825 44.73 MMEWQNQQQQQNQTEQLQMQMQVEQLSNAADGVGGLYVKVMTDEQMELLRQQISVYASICDQLVEMHKAITAQQDLAGMRLGNLYCGPIMACAAGHKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKDITIQLIQYGQISEANVYNWFQNRRARSKRKQANSVPNNADSEPETEVDSPKEKKTKPETFQAYEHFVPKLSNVYSQRSELGAEILSFDTQTNKGEPMFQSFGSGHISQMTPTQNHRNNMSNEKMNVPDYSPYSPCEGYHLVE 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 199267 200824 - Carg08622-RA Car09g00039 153776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00039 274 MobiDBLite consensus disorder prediction 159 187 - -
Car09g00039 274 MobiDBLite consensus disorder prediction 243 259 - -
Car09g00039 274 MobiDBLite consensus disorder prediction 243 274 - -
Car09g00039 274 Pfam Homeodomain 101 161 IPR001356 GO:0003677
Car09g00039 274 ProSiteProfiles 'Homeobox' domain profile. 97 162 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01590 Car09g00039 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g00127 Car-Chr6:791500 Car09g00039 Car-Chr9:199267 7.88E-91 dispersed
Car09g00039 Car-Chr9:199267 Car16g01199 Car-Chr16:10130838 6.40E-89 dispersed
Car01g01590 Car-Chr1:13151809 Car09g00039 Car-Chr9:199267 1.09E-151 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4027 PF00046 Homeodomain 1.00E-17 CL0123 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00039 - - bhj:120085747 478.404