Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car09g00044 | ATGAGCTGGCTTTCTTGCATTCGTCCCCGTCTTAAAGACGCCGGCAAGGTCGAAATCGACAACGACATTGGAAAGGGGAAGGAATCACAGTCCAGCAATGGAAACAACCGGAGATGTGGGGCTGCACGAAGCTTCCCATTTCGCGAGTTAGCCATGGCCACGAGAGGCTTCAAGGAAGTTAACTTGATTGGTGAAGGCGGTTTTGGAAGAGTTTACAAAGGACGATTAGGAACAGGCCAGCTCGTTGCGATTAAACAACTCGACCGTAAAGGTGTTCAGGGATATCAGGAATTCATCGTGGAAGTTCTCATGTTAAGTTTATTAGATGATAGTAATCTTGTCACCTTGATTGGTTATTGTACTGATGGAGATCAAAGACTGTTGGTCTACGAGTATATGTCGATGGGAAGCTTGGAAAACCATCTTTTTGGCTTGTCCCCGGAACGACCGCCATTGAGTTGGAACACTCGAATCAAGATTGCTCTTGGTGCAGCCCAGGGGCTTGAGTATCTTCACTGCACAGCCAATCCACCAGTCATCTACCGTGACTTGAAATCTGCAAACATTTTACTGGATGATGACTTCAATCCAAAGCTCTCGGATTTCGGCCTCGCGAAGTTAGGACCGGTTGGTGACAACACTCATGTTTCCACCAGAGTAATGGGAACACAGGGTTATTGTGCTCCGGAGTATGCCATGAGTGGCAAACTCACCCTTAAGTCTGATATTTATTGCTTTGGTGTAGTTCTGTTGGAGATAATTACAGGTAGGAAAGCTATAGACTCCACCAAGAAACCAGGAGAGCAAAACCTGGTTGTTTGGTCTCGCCCTTTCCTAAAAGACCGGAGGAAGTTCATTCAATTGATCGACCCGCTGCTCGAAGGTCGCTACCATCTTCGTTGTGTACATCATGCAATTGCAATTGCTGCAATGTGTCTCCAGGAGCAGCCAACGTTCCGGCCAATTGTCAGTGATATTGTTGTTGCCCTTGAGTACTTGGCTTCTCAGAGTTACGGATCAGAACAACCGAGGGACGAGGTGCCTAGTCCCTCCAAACCATCTCCTCAAAAGGACAGGCGTTCCCCTGTTCAAGCATCGAGACGTGGAAAGAATTCAAGATTCATGTAA | 1128 | 47.16 | MSWLSCIRPRLKDAGKVEIDNDIGKGKESQSSNGNNRRCGAARSFPFRELAMATRGFKEVNLIGEGGFGRVYKGRLGTGQLVAIKQLDRKGVQGYQEFIVEVLMLSLLDDSNLVTLIGYCTDGDQRLLVYEYMSMGSLENHLFGLSPERPPLSWNTRIKIALGAAQGLEYLHCTANPPVIYRDLKSANILLDDDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTQGYCAPEYAMSGKLTLKSDIYCFGVVLLEIITGRKAIDSTKKPGEQNLVVWSRPFLKDRRKFIQLIDPLLEGRYHLRCVHHAIAIAAMCLQEQPTFRPIVSDIVVALEYLASQSYGSEQPRDEVPSPSKPSPQKDRRSPVQASRRGKNSRFM | 375 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 208991 | 212016 | + | Carg08627-RA | Car09g00044 | 153781 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car09g00044 | 375 | ProSiteProfiles | Protein kinase domain profile. | 57 | 333 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car09g00044 | 375 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672|GO:0006468 | |
Car09g00044 | 375 | ProSitePatterns | Protein kinases ATP-binding region signature. | 63 | 85 | IPR017441 | GO:0005524 | |
Car09g00044 | 375 | Pfam | Protein kinase domain | 57 | 325 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car09g00044 | 375 | MobiDBLite | consensus disorder prediction | 338 | 375 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car01g01585 | Car09g00044 | CCT | |
Car01g01585 | Car09g00044 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car05g00857 | Car-Chr5:8427923 | Car09g00044 | Car-Chr9:208991 | 1.72E-81 | dispersed | |
Car09g00044 | Car-Chr9:208991 | Car06g01271 | Car-Chr6:9107178 | 3.64E-159 | dispersed | |
Car01g01585 | Car-Chr1:13138239 | Car09g00044 | Car-Chr9:208991 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89070 | PF00069 | Pkinase | 3.20E-43 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car09g00044 | - | - | csv:101203407 | 646.351 |