Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00079 ATGCAAACCATTTCTTCTTGTGTCTTCCTTTTGGTTTGTGTCATCTTCTTGCTTCTTTCTGAAAATGCTAAAATAGCTGCTGCTGCAGCTGGGAACAATGGCGTTTACATCGTCTACATGGGATCCGCGTCCAGGACTGATTTCCTTCGCCTTCTTACCTCTGTCAACAGGCGGAATGGAAACGCAGTGGTACGGACTTATAAACATGGGTTCACAGGATTCGCAGCTCGTCTGTCAGAGCAGGAAGCCCATGCCATGAGACAAAGGCCTGGAGTTGTTTCGGTCTTCCCAGATCCAATACTGAAGCTCCACACAACTCATTCATGGGATTTCTTGGTCAGTCAGACAAGCGTCAAAATCGACAGCGCTCCCAAGGCAGATCCCCCGACCTCTTCCTCTCAGCCGTCCGATACCATTATCGGCATCTTGGACACCGGTATCTGGCCGGAATCCGAGAGTTTTAGAGACGAGGGTATGCCTCCGATACCGTCGAGGTGGAAAGGTACGTGCATGGCTGGCGATGACTTCACTTCCTCCAACTGTAACAGAAAAATCGTTGGAGCAAGATTTTACGAAAGTTCTGAGAGCGACGGGATAAGGTTCCACTCACCTCGAGACGGAGCTGGACATGGAACCCACGTGGCTTCAACAGCGGCCGGCAGTGCCGTGGCTAATGCATCCTACTATGGCCTCGCAGCCGGGACGGCCAAGGGCGGCTCCCCCGGCTCAAGGATCGCCATGTATAGAGTCTGTATGGCCGATGGTTGTCATGGATCGTCAATCCTGGCAGCGTTTGATGATGCCATTAACGATGGGGTCGATGTATTATCCTTATCTCTCGGTGCGCCCACCTACTACAAACCGGAATTGACGACCGACCCCATTGCCATCGGAGCCTTTCATGCAGTTGAGAAGGGGATTACAGTTGTCTGCTCTGCTGGAAACGACGGCCCCACTCCGGGATCGGTGGTGAACGACGCGCCGTGGATTCTAACAGTGGCTGCCTCCACCATTGATAGGGATTTTGAGTCTGATGTTGTGCTGGGCAACAAAAAAGTGATCAAGGGAGAAGGTATAAATTTCTCTGCTCTTGAAAGCTCTCCTGTATACCCACTGATACATGGCAAATCGGCCAACAAATCGAGTACCAGTGAAGACAGTGCGAGGATTTGTTCTGAAGGCTCCATGGACGAAGCTCTTGTGAAGGGGAAGATAGTTATTTGTGAGAGCAGTGAGGAAGGAGGCGGTTCCTATTGGCAAGGTCAGGCTGAGACAGTGGAGAGCCTTGGAGGGGTCGGGATAGTTCTCATTGATGACCAAACAAAGCTAGTGGCAGAGAAATTTACTTCTCCCATCACCGCTATTAGCTCAAAGGATGGCGATGAGGTCCTTGCCTATGTTCACTCAAGCAGGAACCCAGTTGCTACAATCCTGCCCACCCTGACCGTAATAAACTATAAGCCAGCGCCCGCTATGGCATACTTTTCATCCAGAGGGCCCAATCCCGCAGTATTAAACATGATCAAGCCGGACATATCAGCACCAGGAGTGAACATTCTTGCAGCCTGGCTTGGAAATGACACGAACTCTACTCCGCAACCAGAAAATTCGCCGCTCTTCAATGTGATCTCAGGAACTTCAATGTCCTGCCCGCATGTCTCCGGCGTAGTAGCCATGCAATTTTCTCACGAAAACTTCACAGCAATCCAAACGAATAACTTGGAATCGCCGATGACTTTGGATACGGGATCAGTAGCTACACCTTATGATTATGGGGCAGGAGAGATATCAACCACCGGAGCATTAAAACCAGGACTGGTCTATGAAACTAGTACAACTGACTACTTAATCTACCTTTGTGGCCGAGGCTATAACCGGTCCACCATAAAGAGCATCGCAAATACTGTTCCTGATGGGTTTGATTGCCCCAAGGATTCTAATGCAGACTACATATCCAACATGAACTACCCAACAATAGCAGTGTCCGAATTGAAAGGCAGCGAAAGCAAGAAAATAGTGAGAACAGTTACAAATGTTGGTGGTGATGGTGCAACAGTTTACAAAGTCAGTGTGGACGCACCTGGGGAAGTAGATGTCAAAGTGATTCCAGAGAAATTGGAATTTTCAAAGAACAATCAGAAGCAGAGTTACAAAGTGGTGTTCACCTCAACTGTGTCCACACTGAAGAAAGAAGCCTTTGGTTCAATAACTTGGAGCAATGGAAAACATCGAGTCCGGAGTCCATTTGTGGTAACCAGTGAGAGTAGTAAGTCAGAAGATTAG 2283 48.97 MQTISSCVFLLVCVIFLLLSENAKIAAAAAGNNGVYIVYMGSASRTDFLRLLTSVNRRNGNAVVRTYKHGFTGFAARLSEQEAHAMRQRPGVVSVFPDPILKLHTTHSWDFLVSQTSVKIDSAPKADPPTSSSQPSDTIIGILDTGIWPESESFRDEGMPPIPSRWKGTCMAGDDFTSSNCNRKIVGARFYESSESDGIRFHSPRDGAGHGTHVASTAAGSAVANASYYGLAAGTAKGGSPGSRIAMYRVCMADGCHGSSILAAFDDAINDGVDVLSLSLGAPTYYKPELTTDPIAIGAFHAVEKGITVVCSAGNDGPTPGSVVNDAPWILTVAASTIDRDFESDVVLGNKKVIKGEGINFSALESSPVYPLIHGKSANKSSTSEDSARICSEGSMDEALVKGKIVICESSEEGGGSYWQGQAETVESLGGVGIVLIDDQTKLVAEKFTSPITAISSKDGDEVLAYVHSSRNPVATILPTLTVINYKPAPAMAYFSSRGPNPAVLNMIKPDISAPGVNILAAWLGNDTNSTPQPENSPLFNVISGTSMSCPHVSGVVAMQFSHENFTAIQTNNLESPMTLDTGSVATPYDYGAGEISTTGALKPGLVYETSTTDYLIYLCGRGYNRSTIKSIANTVPDGFDCPKDSNADYISNMNYPTIAVSELKGSESKKIVRTVTNVGGDGATVYKVSVDAPGEVDVKVIPEKLEFSKNNQKQSYKVVFTSTVSTLKKEAFGSITWSNGKHRVRSPFVVTSESSKSED 760
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 398345 401449 + Carg08662-RA Car09g00079 153816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00079 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Car09g00079 760 ProSitePatterns Serine proteases, subtilase family, histidine active site. 210 220 IPR022398 -
Car09g00079 760 Pfam Fibronectin type-III domain 653 751 IPR041469 -
Car09g00079 760 Pfam Subtilase family 136 562 IPR000209 GO:0006508|GO:0008236
Car09g00079 760 Pfam Peptidase inhibitor I9 35 104 IPR010259 -
Car09g00079 760 ProSiteProfiles Serine proteases, subtilase domain profile. 108 602 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g00411 Car-Chr5:2337419 Car09g00079 Car-Chr9:398345 0 dispersed
Car06g00403 Car-Chr6:2240222 Car09g00079 Car-Chr9:398345 2.74E-159 dispersed
Car09g00079 Car-Chr9:398345 Car07g00646 Car-Chr7:3282729 1.81E-168 dispersed
Car09g00079 Car-Chr9:398345 Car20g00658 Car-Chr20:3717241 8.51E-170 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00079 K25898 - csv:101213415 1221.45