Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00084 ATGAGGAAAAAATCGCTCCATCCTGTTCTTTCCCACTTGTTTATCCTCGTTTTACTTCTTTTCTCTGCCAGTTTTTGTTTCGCCAATCGCGATATGGAAGCGCTGTTGAAGATGAAGAGCGCCATGATCGGACCCGGGAGGTCGGCGCTTGATAATTGGGAGCCGTCGTCGTCCCCGTCTGCTCATTGCGATTTCTCCGGCGTTACGTGTGACGGCGATCACAGAGTTGTTGCGCTTAACGTCTCGAATTTTCGTTTATTCGGCCCGATTCCGCCAGAGATTGGGATGTTGGACAAGATTGAGAACTTGACCTTAGTGAGTGACAATCTCACTGGAGGACTTCCTCTCGAAATGGCAAAACTCACATCGCTTAAGATTCTTAACCTATCTAACAACGCATTTCATGATAAGTTGCCGGCTGAAATCACGCTCGGAATGACCGAACTCGAGGTTTTTGATGTCTATAATAACAATTTCTCCGGTCCGCTCCCGGTGGAATTTGTCAAACTGAAGAAGCTTAAGCATCTTGACCTTGGTGGATGTTACTTCACAGGTCAGATTCCTTCTGTTTACTCGGAGATGCAGACGTTGGAGTTCTTAAGCGTGCGGGGAAATGCGCTTACCGGAAGTATTCCAGCGAGTTTGGCGCGGCTGAAGAATCTTAGGTATCTTTACGCCGGATATTTTAACCATTTCGACGGCGGGATTCCGGCCGAGTTCGGATCGTTGAGTTCTCTTGAGCTTCTCGATTTAGCCAACTGTAACCTCTCCGGTGAAATTCCTCCGAGTATGGGGAATTTGAAGCACCTGCATAGTCTATTTCTACAAGTAAACAATATAACCGGTCGGATTCCCCCTGAACTTTCCGGTCTGATTAGCCTCAAGTCACTGGACCTCTCACTGAACGAACTCACCGGAGAGATACCGTCGAGTTTCGCGGAACTGCAGAACCTCACGCTGATCAATTTGTTCAACAACAAGCTTCATGGTCCAATCCCTGGTTTCATAGGTGATTTTCCACATCTTGAAGTGCTTCAGTTGTGGAGTAACAACTTCACGCTGGAGCTCCCCGAGAATCTAGGGCGTAACGGAAAACTGTTTCTGCTCGACGTGGCGACAAATCATCTAACTGGACTCATTCCTCCGGATTTATGTAATGGTAGGTTGAAGACTTTGATTCTGTTGGATAATTACTTCTATGGGCCCATCCCTGAGAAATTAGGCCGATGTGATTCACTTACGAAAATAAGAATTGCGGGAAATTTCTTCAACGGAACGGTTCCGGCAGGGTTCTTCAACTTCCCGGCGTTGGAGCTACTTGATATCAGTAATAATTACTTCTCTGGCGCTCTTCCGTCGCAAATGTCTGGCGAGTTTCTTGGAACTCTGCAGCTTAGTAACAACCATATTACCGGGGAAATCCCGGCCGCTATTAAGAATTTAGAAAACTTGCAGGTTGTTTCTCTGGAATATAACCAATTCTCTGGGCATTTGCCCGTGGAAATATTTGAATTGAACAAGTTGCTGAGGATTAACATCAGCTTTAACGATATTAGCGGCGAAATTCCGCATTCAGTTATTCAGTGCTCGTCTTTAACGTCAATCGATCTCAGTGAAAATCATCTCGTCGGCCAAATTCCCAGGGGATTGTCGAAGCTGAAAATCTTGAGCGTCCTCAATTTGTCAAGAAATCAAGTGTCGGGCCAAATTCCTGACGAGATTCGGTTGATGATGAGTCTTACAGTTCTTGATTTGTCATACAATAACTTCTTCGGTAGAATCCCCACAGGCGGTCAGTTTTCGGTATTCAACGGCAGCGCCTTCGCCGGAAACCCTAACCTCTGCTTCCCCAGCCACGGATCTTGCGGATCTCTACACAAGAATTCGAAATCTGTTAAGCTAATCATTTCAATCGTCGCGATATTCACCGTTTTATTATGCGTATTCGTCGCAGTTTATCTCAGAAAGAGAAAGAGGATTCAGAAATCAAAGGCATGGAAACTCACAGCGTTCCAACGCCTCAATTTTAAATCGGAGGACGTCCTCGAGTGTTTGAAGGAGGAGAATATCATCGGCAAAGGCGGCGCTGGCGTCGTCTACCGTGGATCAATGCCAGACGGCTCCATCGTAGCTATTAAACTGTTGTTAGGAAGCGGCCGGAACGACCACGGTTTCTCTGCTGAAATTCAAACTCTAGGGCGAATCAAGCACCGGAACATCGTCAGGCTTTTGGGTTACGTGTCGAACAGAGACACGAATCTGCTTCTATACGAGTACATGCCGAATGGGAGCTTGGACCAGAGGCTGCATGGAGTGAAGGGCGGGCATTTGCATTGGGACTTGCGGTACAAGATCGCGATGGAAGCCGCCAAGGGGCTCTGTTACTTGCACCACGATTGTACGCCGCTGATCATCCACAGGGACGTGAAGTCCAATAATATACTGCTTGATAAGCTCTTTGACGCTCATGTCTCTGACTTTGGGCTCGCCAAGTTCTTCCAGAATGGCGGCGCCTCCGAGTGTATGTCCTCCATTGCCGGCTCATACGGCTACATTGCTCCAGAATACGCCTACACACTGAAAGTGGACGAGAAGAGCGATGTGTACAGTTTCGGTGTGGTGCTGCTGGAGCTGATAGCAGGGAGGAAGCCAGTGGGGGATTTTGGAGAAGGCGTGGACATAGTGAGGTGGGTCCTCAAAACCTCATCAGAACTCTCTCAACCGTCCGATGCTGCCTCAGTATTAGCCGTGGTGGACTCGCGCCTCGCCGAATACCCTCTCCAAGACGTAATCCACCTCTTCAAAATAGCCATGATGTGCGTGGAAGAAGACAGCTCTGCAAGGCCAACCATGAGGGAGGTTGTTCACATGCTCTCAAATCCCCCAAGGTCTGTCCCTGTTCTCATCAACCTCTAA 2916 48.01 MRKKSLHPVLSHLFILVLLLFSASFCFANRDMEALLKMKSAMIGPGRSALDNWEPSSSPSAHCDFSGVTCDGDHRVVALNVSNFRLFGPIPPEIGMLDKIENLTLVSDNLTGGLPLEMAKLTSLKILNLSNNAFHDKLPAEITLGMTELEVFDVYNNNFSGPLPVEFVKLKKLKHLDLGGCYFTGQIPSVYSEMQTLEFLSVRGNALTGSIPASLARLKNLRYLYAGYFNHFDGGIPAEFGSLSSLELLDLANCNLSGEIPPSMGNLKHLHSLFLQVNNITGRIPPELSGLISLKSLDLSLNELTGEIPSSFAELQNLTLINLFNNKLHGPIPGFIGDFPHLEVLQLWSNNFTLELPENLGRNGKLFLLDVATNHLTGLIPPDLCNGRLKTLILLDNYFYGPIPEKLGRCDSLTKIRIAGNFFNGTVPAGFFNFPALELLDISNNYFSGALPSQMSGEFLGTLQLSNNHITGEIPAAIKNLENLQVVSLEYNQFSGHLPVEIFELNKLLRINISFNDISGEIPHSVIQCSSLTSIDLSENHLVGQIPRGLSKLKILSVLNLSRNQVSGQIPDEIRLMMSLTVLDLSYNNFFGRIPTGGQFSVFNGSAFAGNPNLCFPSHGSCGSLHKNSKSVKLIISIVAIFTVLLCVFVAVYLRKRKRIQKSKAWKLTAFQRLNFKSEDVLECLKEENIIGKGGAGVVYRGSMPDGSIVAIKLLLGSGRNDHGFSAEIQTLGRIKHRNIVRLLGYVSNRDTNLLLYEYMPNGSLDQRLHGVKGGHLHWDLRYKIAMEAAKGLCYLHHDCTPLIIHRDVKSNNILLDKLFDAHVSDFGLAKFFQNGGASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGRKPVGDFGEGVDIVRWVLKTSSELSQPSDAASVLAVVDSRLAEYPLQDVIHLFKIAMMCVEEDSSARPTMREVVHMLSNPPRSVPVLINL 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 426464 429446 + Carg08667-RA Car09g00084 153821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00084 971 Pfam Leucine Rich repeat 293 307 IPR001611 GO:0005515
Car09g00084 971 Pfam Leucine rich repeat N-terminal domain 28 71 IPR013210 -
Car09g00084 971 Pfam Leucine Rich Repeat 245 267 IPR001611 GO:0005515
Car09g00084 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Car09g00084 971 Pfam Protein kinase domain 686 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00084 971 Pfam Leucine rich repeat 462 518 IPR001611 GO:0005515
Car09g00084 971 Pfam Leucine rich repeat 531 590 IPR001611 GO:0005515
Car09g00084 971 Pfam Leucine rich repeat 123 181 IPR001611 GO:0005515
Car09g00084 971 ProSiteProfiles Protein kinase domain profile. 685 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01552 Car09g00084 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00084 Car-Chr9:426464 Car16g00765 Car-Chr16:4852458 0 dispersed
Car01g01552 Car-Chr1:12971729 Car09g00084 Car-Chr9:426464 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89073 PF00069 Pkinase 7.00E-43 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00084 K00924 - csv:101221360 1721.83