Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00086 | ATGGGAACACAAATTTGGTTCATATTATATCTTCTAACCATCCAAATTTCAATATCAGGAGTATTATCCACCACTTTCAGCATAGTGAATAAATGTGAGTACACAGTTTGGCCGGGAATTCTCTCCAACGCCGGAGTTCCACCACTTCCCGCCACCGGCTTCGTCCTCGCTGCTGGCGACTCCAAAACAATCTCTGCTCCGGGGTCATGGGGGGGCCGATTCTGGGGCCGGACCCACTGTTCACAAGACTCCAATGGAAAATTCTCTTGCCTCACTGGTGACTGCGGCTCCGACAAGGTCGAGTGCGGCGGGAACGGCGCGAAGCCGCCGGCTACTCTGGCGGAGTTCACCCTCGATGGCGCTGGCGGCCTTGACTTCTTCGATGTGAGTTTGGTCGATGGTTACAATATTCCTATGCTAGTTGTCCCGCAGGGCGGCACCGGCGAGAAATGTGTAAGCACGGGGTGCGTTGTGGATTTGAACGGCGCGTGTCCTCAAGAGCTCAAGGTTTTCAGCGTGGACGGCGGAGAGAACGTCGCGTGTAAAAGCGCGTGTGAAGCTTTCAACGAACCGCAGTACTGTTGCAGTGGCGATCAGAAATCAACGGAAGGTCACAACACAAGCACGCCGGCAGTTAATGGCGGCAACGACACTATGGTTTACGAAGGGGCTGGATATGATCTAAGCAGCGCGTCGAGAACAACGCTCCGCGGTATACTGGGGGTAGCCATTGCCACGGTGTCCATTCTTCAATCTCGGCAGCTATTTTGA | 771 | 54.09 | MGTQIWFILYLLTIQISISGVLSTTFSIVNKCEYTVWPGILSNAGVPPLPATGFVLAAGDSKTISAPGSWGGRFWGRTHCSQDSNGKFSCLTGDCGSDKVECGGNGAKPPATLAEFTLDGAGGLDFFDVSLVDGYNIPMLVVPQGGTGEKCVSTGCVVDLNGACPQELKVFSVDGGENVACKSACEAFNEPQYCCSGDQKSTEGHNTSTPAVNGGNDTMVYEGAGYDLSSASRTTLRGILGVAIATVSILQSRQLF | 256 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 437417 | 438930 | - | Carg08670-RA | Car09g00086 | 153823 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00086 | 256 | Pfam | Thaumatin family | 30 | 203 | IPR001938 | - | |
| Car09g00086 | 256 | ProSiteProfiles | Thaumatin family profile. | 23 | 197 | IPR001938 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Car09g00086 | Car12g00381 | CCT | |
| Car01g00899 | Car09g00086 | CCT | |
| Car01g00899 | Car09g00086 | ECH | |
| Car09g00086 | Car12g00381 | ECH | |
| Car05g00808 | Car09g00086 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car09g00086 | Car-Chr9:437417 | Car20g00665 | Car-Chr20:3747654 | 4.57E-65 | dispersed | |
| Car01g01550 | Car-Chr1:12961740 | Car09g00086 | Car-Chr9:437417 | 1.23E-161 | wgd | |
| Car12g00381 | Car-Chr12:2434079 | Car09g00086 | Car-Chr9:437417 | 1.60E-59 | wgd | |
| Car03g00627 | Car-Chr3:5720392 | Car09g00086 | Car-Chr9:437417 | 8.43E-70 | wgd | |
| Car05g00259 | Car-Chr5:1442406 | Car09g00086 | Car-Chr9:437417 | 1.47E-104 | wgd | |
| Car07g00370 | Car-Chr7:1850908 | Car09g00086 | Car-Chr9:437417 | 7.29E-66 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00086 | - | - | csv:101214136 | 434.106 |