Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00111 ATGGCCGATATTGGGAGCTCAGCTTCTGGGAGCAGAATGTGGTGCTCCATTCCCGAGAAGCTTCAACTCCATGCCGCCATGCTGGCCTTGCAGTTTGGCTACGCTGGCTTCCACGTTGTCTCAAGGGCTGCCCTTAATATGGGCATTAGTAAACTTGTGTTCCTTGTTTACAGGAACATCATTGCCTTTCTCCTCCTCCTTCCCTTTGCATATTTCCTCGAAAAGAAGGAACGCCCTCCCATTTCTCTCAATTTCCTCCTTCAATTCTTCCTTCTTGCCCTCGTTGGAATCACGGCCAATCAAGGGTTCTACTTGCTAGGTTTGGAGCACACGTCGCCGACGTTTGCATCGGCTATACAAAACTCGGTTCCGGCCATTACATTTCTCATGGCAGCATTGCTCCGGCAAGACATCTATTTATTTATACACAATTTTTTTTAA 441 47.62 MADIGSSASGSRMWCSIPEKLQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFLVYRNIIAFLLLLPFAYFLEKKERPPISLNFLLQFFLLALVGITANQGFYLLGLEHTSPTFASAIQNSVPAITFLMAALLRQDIYLFIHNFF 146
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 551336 551947 + Carg08695-RA Car09g00111 153848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00111 146 Pfam EamA-like transporter family 27 134 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00111 Car-Chr9:551336 Car11g00270 Car-Chr11:1484703 3.99E-47 dispersed
Car12g00412 Car-Chr12:2632584 Car09g00111 Car-Chr9:551336 2.50E-75 wgd
Car05g00227 Car-Chr5:1189261 Car09g00111 Car-Chr9:551336 6.44E-76 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00111 - - cpap:110821298 224.942