Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00157 ATGCCCTCCGCGCTTGTCGTCGCCCTCCTCCTCCTCGCCGTCTCCGCGGTCGCTAATGCCGCGAATTTCAGAGAAGCCCCCCAATTTTACAACTCCCCAGATTGCCCCTCCATTGCCGACGACCTCCAGGACCCCGACGCGAACGAACAACATCTCTGCTTCGATCGCGCCGTCCATGTCGCGATGACGTTGGATACCGCCTATATACGTGGCTCCATGGCTGCCGTTCTTTCCGTCCTCCAACACAGTTCTTGTCCCCAAAACGTAATTTTCCACTTCGTCTATTCCGCATCCGCCAACGTGTCGTCTTTACGCGCCGTCGTCTCCCGCTCATTCCCTTACCTGAAATTCCAACTCTACCCTTTCGACGAGGAGGCGGCATCGCGATTGATCTCCACGTCAATCCGATCCGCGTTGGACTGTCCGTTGAACTACGCACGTAGCTACTTGGGCAGCCTCCTTCCCACGTGCATCGCCCGGGTCGTGTACCTTGACTCGGATCTAATCCTAGTCGACGACATTGCGAAACTCGCCGCCCACCCACTCAGCGGGGACTCGGTCCTTGCCGCGCCGGAGTACTGCAACGCTAATTTCACCACCTACTTCACGCCGTCGTTTTGGTCCAACCCGTCTCTGTCTTTGACGTTTGCAAACCGGAAAGCGTGTTACTTCAACACGGGGGTTATGGTGATCGATCTGGACCGGTGGCGGGCCGGAGATTACACGGCGAAGATCGAGGATTGGATGGAATTGCAAAAGAGGATGAGAATCTACGAATTGGGGTCGTTGCCGCCGTTTTTGTTGGTGTTCAGCGGGAGGATTACTCCAGTGGACCACCGGTGGAACCAGCACGGGCTGGGCGGCGATAATATCAGAGGGCTGTGCAGGAATCTGCACCCTGGTCCAGTAAGTTTGTTGCACTGGAGTGGGAAAGGTAAACCGTGGGATCGATTGGACGCGAACCGGCCCTGCCCTGTGGACTCCCTTTGGGCTCCATATGATTTGTTACAGACCCCATTTTCGATTGATTCCTAA 1035 56.23 MPSALVVALLLLAVSAVANAANFREAPQFYNSPDCPSIADDLQDPDANEQHLCFDRAVHVAMTLDTAYIRGSMAAVLSVLQHSSCPQNVIFHFVYSASANVSSLRAVVSRSFPYLKFQLYPFDEEAASRLISTSIRSALDCPLNYARSYLGSLLPTCIARVVYLDSDLILVDDIAKLAAHPLSGDSVLAAPEYCNANFTTYFTPSFWSNPSLSLTFANRKACYFNTGVMVIDLDRWRAGDYTAKIEDWMELQKRMRIYELGSLPPFLLVFSGRITPVDHRWNQHGLGGDNIRGLCRNLHPGPVSLLHWSGKGKPWDRLDANRPCPVDSLWAPYDLLQTPFSIDS 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 747771 748805 + Carg08741-RA Car09g00157 153894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00157 344 Pfam Glycosyl transferase family 8 59 317 IPR002495 GO:0016757
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01471 Car09g00157 CCT
Car09g00157 Car12g00466 CCT
Car01g01471 Car09g00157 ECH
Car09g00157 Car12g00466 ECH
Car05g00179 Car09g00157 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car07g00738 Car-Chr7:3808565 Car09g00157 Car-Chr9:747771 0 dispersed
Car09g00157 Car-Chr9:747771 Car04g01568 Car-Chr4:9088908 1.28E-133 dispersed
Car01g01471 Car-Chr1:12580917 Car09g00157 Car-Chr9:747771 0 wgd
Car12g00466 Car-Chr12:2941124 Car09g00157 Car-Chr9:747771 0 wgd
Car03g00925 Car-Chr3:7268186 Car09g00157 Car-Chr9:747771 0 wgd
Car05g00179 Car-Chr5:954364 Car09g00157 Car-Chr9:747771 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00157 K20893 - csv:101211531 624.009