Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00168 ATGAAGGGCTTGGGCTGTTGTTTGTTTATCTGTGTGCTTCTGTCAACATTTTCAATTTTGTCTTCGGCGCTTACTGATGCGGAAGCTTCTTTCATTGCCGGCCGCCAACTTCTAGCCCTGCATATGAACGAAGATTTGCCCGACAATTACGATCCCAAGGTCGAGATCAATGAGCCCTTTGCCAATCCAAGGCTCCGACGGGCATACGTTGCGCTTCAAGCCTGGAAGGTGGCTATTTATTCAGACCCTTTAAACACCACCGCCAATTGGGTCGGCGCTGATGTCTGCCACTACACTGGAGTTTACTGCGCTACTGCTCTCGACGACTCCACCGTCGAAGTCGTCGCCGGCATTGACCTTAACCACGCCGACATTGCTGGTTACCTGCCGGTTGAGCTCGGTCTGCTTGCTGACATAGCCTTATTCCACATCAACACCAACCGATTCTGCGGAATCATCCCAACAAGCTTCTCGAGGATGACTCTGCTTCACGAGCTCGACCTTAGCAACAACCGATTTGTTGGCTATTTTCCTGAGGTGGTTGTGAGGATTCCTAATCTGAAATTTCTTGACCTCAGGTTCAATAATTTCGAAGGCCCATTGCCTCCTCAACTTTTCAACAAGACACTCGATGCCATTTTCCTTAACAACAACAGATTCACCTCCAACATTCCCGATACTTTTGGGGATTCGCCGGCGTCGGTGATTGTGTTTGCCTACAACCATTTCACGGGATGCATTCCGAGCTGCATTGGAAAAATGGGGAACACACTGAACCAGTTGGTAATGTTGAACAATGATTTCGCTGGTTGTTTGCCCCCTGAAGTTGGGATGCTTGGGAATATCGTGGTTTTCGATATCTCCGCCAACATGTTTAGTGGGATCTTGTCCAAGAGCTTCGATGGCCTAAAGAAGGTCGAGATTTTGGATATTTCTAACAATTCCTTGACTGGGGTTGTGGAGGAAGGCTTGTGCAACTTGCCCAAATTGGCTGAATTCACCTTCTCTCACAATTTCTTCAATGGCGAGGCAGAGAAGTGCGTGCCGCAGAGTAGAAAGGATGTTGTGTTCGATGATACTGCAAATTGCTTGCCCGAGAGGCCCAAGCAGAAGGCGGCTGAGGCTTGTACTCCGGTGACCAGCAAGAGTGTTGATTGCAGTAAGGCTATGTGCGGCGGAGGAGCGTCATCGCCGTCGTCGATGCCGTGGCCATGGAAGTCACACTCACCACACACACCACAAACACCAGGACGTGTTCATCATCCTCTTTCTCCACCTTCATTACATTCTCAACCACCAACGCCCTCGTCACCTCAAGCACCAGTTCACTCTCACACACCATCGGCCTCATCACCCCAACCACCGGTTCACTCTCACACACCATCGGCCTCATCACCCGAGGCAACAGTCGAATCTGAAACCCCGGCTGCCCCATCACCCGAGGCAACAGTCGTCCGAATCTGA 1464 50.61 MKGLGCCLFICVLLSTFSILSSALTDAEASFIAGRQLLALHMNEDLPDNYDPKVEINEPFANPRLRRAYVALQAWKVAIYSDPLNTTANWVGADVCHYTGVYCATALDDSTVEVVAGIDLNHADIAGYLPVELGLLADIALFHINTNRFCGIIPTSFSRMTLLHELDLSNNRFVGYFPEVVVRIPNLKFLDLRFNNFEGPLPPQLFNKTLDAIFLNNNRFTSNIPDTFGDSPASVIVFAYNHFTGCIPSCIGKMGNTLNQLVMLNNDFAGCLPPEVGMLGNIVVFDISANMFSGILSKSFDGLKKVEILDISNNSLTGVVEEGLCNLPKLAEFTFSHNFFNGEAEKCVPQSRKDVVFDDTANCLPERPKQKAAEACTPVTSKSVDCSKAMCGGGASSPSSMPWPWKSHSPHTPQTPGRVHHPLSPPSLHSQPPTPSSPQAPVHSHTPSASSPQPPVHSHTPSASSPEATVESETPAAPSPEATVVRI 487
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 835696 837159 + Carg08752-RA Car09g00168 153905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00168 487 MobiDBLite consensus disorder prediction 391 487 - -
Car09g00168 487 MobiDBLite consensus disorder prediction 441 472 - -
Car09g00168 487 MobiDBLite consensus disorder prediction 400 414 - -
Car09g00168 487 Pfam Leucine rich repeat 284 338 IPR001611 GO:0005515
Car09g00168 487 Pfam Leucine rich repeat 143 197 IPR001611 GO:0005515
Car09g00168 487 MobiDBLite consensus disorder prediction 426 440 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car08g00779 Car-Chr8:5095935 Car09g00168 Car-Chr9:835696 4.43E-161 dispersed
Car09g00168 Car-Chr9:835696 Car17g00412 Car-Chr17:2744096 7.17E-146 dispersed
Car10g00558 Car-Chr10:2821826 Car09g00168 Car-Chr9:835696 5.90E-145 dispersed
Car10g00613 Car-Chr10:3120508 Car09g00168 Car-Chr9:835696 4.21E-107 dispersed
Car01g01460 Car-Chr1:12495604 Car09g00168 Car-Chr9:835696 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00168 - - cpep:111797371 927.546