Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00187 CTCTCTCTCTCTCTCTCTCTCTTGTGCGCGCGGAAGAGCAATGGAATTTTTGCAGGGTGCCGGGATCCGCGTTTCTCGATCGATGAAGTCAATTCGATTGATGGAGTTGTTCCCAATTTTGGTGTAGTTGTCATCAATCAATCGCCTGAGTTTTCGTCTCCTCTTGCCTGCTGTTTTGCAATTTTGAGGACGCGAAACACAATGTCCACGAGGAGTGAACATCATACAGTCCCGCTGTCCGTGCTCCTGAAGCGTGAATTGGCGATTGAGAAGATTGAGAGACCGGAAATCGTACATGGTCAGGCGAGTCAGAGTAAGAAAGGGGAGGATTTTACATTACTGAAGTCGGAATGCGAGAGGGTGGTCGGGGATGGAGTCTCTACATATTCGGTTTTTGGGCTTTTTGATGGACATAATGGATCTGCCGCTGCTATTTATACTAAGGAAAATTTGTTGAACAATGTTTTAGCTGCTATTCCGTCAGATCTCAACAGAGACGAATGGGTTGCAGCATTGCCAAGGGCCTTGGTTGCTGGTTTTGTGAAGACGGACAAAGATTTCCAAGAGAAAGCACAAACATCAGGAACCACCGTCACCTTCATGATCATTGAGGGATGGGTTCTCACTGTTGCTTCTGTTGGGGATTCCCGTTGCACGTTAGAATCAGCTGAAGGTGACATCTTCTACTTATCAGCAGATCATAGGCTAGAATGCAACGAAGAAGAGAGAGAACGTATAATTGCTAGTGGCGGTGAGGTGGGCCGGCTGAATACTGGTGGTGGTGCAGAGATTGGTCCATTGAGATGCTGGCCAGGTGGCTTGTGTCTATCACGATCGATTGGTGATATGGATATTGGCGAGTTTATAGTGCCTGTACCCTACGTGAAGCAAGTTAAGCTATCTTCTACTGGTGGTAGGGTTATTATTTCAAGTGATGGTGTTTGGGATGCTTTATCAGCTGAAACTGCCTACGATTGCTGTCGGGGGATGCCGGTAGAAACTGCTGCTGCACAGATTGTTAAAGAAGCAGTACAGTCAAAGGGACTTCGCGATGATACTACATGCATTGTGATTGATATATTACCAAGGGAGAAACCATCTACTGCTTTGCCGCCAACGAAGAAGCAGGGAAAAAGAATGTTTAAATCAATGTTCCGCAAAAAGACTTCTGAATCATCTTCTCATCTTGATAAGGAATATAATGAGCCGAATGTTGTTGAGGAATTATTTGAGGAAGGATCGGCTATGCTGTCAGAAAGGTTAGAGGCGAAGTATCCTATCTGCAACATGTTTAAGCTGTTTGTATGTGCAGTATGCCAAGTTGAGATCCAACCTCGGGAGGGTATCTCCATATATGCCGGCTCATCTAGCAGAGGAAAATTGCGTGCTTGGGATGGACCTTTTCTATGCTTAAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAAAGACCTTCTGGAGGTCTGTGGATCCTGTGTTTTAAAGACACAGCAGCGGAAGTGACTAGCCTACTCTCCAGTTACACTTCATTGTGGGTGCACTGA 1545 45.83 LSLSLSLLCARKSNGIFAGCRDPRFSIDEVNSIDGVVPNFGVVVINQSPEFSSPLACCFAILRTRNTMSTRSEHHTVPLSVLLKRELAIEKIERPEIVHGQASQSKKGEDFTLLKSECERVVGDGVSTYSVFGLFDGHNGSAAAIYTKENLLNNVLAAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFMIIEGWVLTVASVGDSRCTLESAEGDIFYLSADHRLECNEEERERIIASGGEVGRLNTGGGAEIGPLRCWPGGLCLSRSIGDMDIGEFIVPVPYVKQVKLSSTGGRVIISSDGVWDALSAETAYDCCRGMPVETAAAQIVKEAVQSKGLRDDTTCIVIDILPREKPSTALPPTKKQGKRMFKSMFRKKTSESSSHLDKEYNEPNVVEELFEEGSAMLSERLEAKYPICNMFKLFVCAVCQVEIQPREGISIYAGSSSRGKLRAWDGPFLCLSCQEKKEAMEGKRPSGGLWILCFKDTAAEVTSLLSSYTSLWVH 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 943952 948730 + Carg08771-RA Car09g00187 153924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00187 514 Pfam Protein phosphatase 2C 117 345 IPR001932 -
Car09g00187 514 ProSiteProfiles PPM-type phosphatase domain profile. 98 360 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01442 Car09g00187 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00187 Car-Chr9:943952 Car18g00925 Car-Chr18:9998470 2.04E-158 dispersed
Car01g01442 Car-Chr1:12406566 Car09g00187 Car-Chr9:943952 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00187 - - bhj:120085570 836.639