Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00206 ATGAATAGCACAACTTTCGTCTGTAATCCTATGGACGCTCTGCCATTATTACCCTCCTCTCATTTGCTGTTTCCGAATAACGCCCTCAATTTCAGGCATAGGATCTCCATTCGTGTAAAACCCACTTCTCAGGGTTCGTGTAGATGGCGAATCCGAGCCACTGCCGAAAATGGAGCTTCATCGGCGTCGACCTCGCAGATCGACATGGTGAGGAACAGGGAGGGGGTTTTTACCGCCAAACAAAGCAAGGTTGTTGTGCTTTGGGATCTCGATAATAAGCCCCCTCGTGGGCCGCCTTACGAGGCGGCTATGGCGCTGAAACGAGTGGCGCAACGCTTCGGCCAAGTGGTCGACATGTCGGCTTACGCCAATCGCCACGCCTTTATCCATTTGCCGCAATGGGTTGTTGAAGAACGCCGCGAGCGTCGGCAATTGGACATTCTTGAGCGCAAAGGATTGTTCACGCCGTCCGAATCTTACGTCTGCGGGGTCTGCGGTCGAAAGTGCAAAACAAACCTAGACCTCAAGAAGCATTTCAAGCAACTTCATGAACGCGAGCGCCAGAAGAAATTGAACAGAATGAGGTCTCTCAAGGGCAAAAAGCGGCAGCGTTATAAGGAAAAATTCGTATCTGGGAACCACAAGTACAATGAAGCGGCCAGGTCTCTGATTACTCCAAAAGTTGGGTATGGGCTGGCCTCAGAATTGAGACGTGCTGGGGTTTTTGTGAAGACAGTGGAGGATAAGCCACAGGCGGCTGATTGGGCTTTGAAGAGGCAGATGCAACACTCGATGAGTCGTGGTATTGATTGGATGTTTCTTGTTTCCGATGATTCGGATTTTTCAGAGATGTTAAGGAAGGCTAAGGAGGCTAATTTGGGAACCGTGGTGGTGGGAGATCGTGATAGAGCATTGGGTAGGCACGCAGATTTATGGGTCCCATGGATGGGGGTTGAAAATGGGGATGTTACAGAGGAGGATTTGGTGCCCAAAAGATGGAGGACGAGGAGAACCGAGGAGGATTTGGATGAAGACGATGGTTTTTCAGTTTCTCGTTATTATGGAGAGGTTGAAAGTGGTAATGATTTGGAGAGTGTAGTGCAAGAGCTTGCTTCCGCCAGTACAGAGTTCAACGGCTTTAGAATTTCTGCTTTCTCAGAGGGGGAAGATGATGATGAATGGGTTGAAGACGATGTGGCATCTGAGTATCTGCTAGAGATGAGTGACGAGGAAGATGGGTATTTCTAA 1248 49.28 MNSTTFVCNPMDALPLLPSSHLLFPNNALNFRHRISIRVKPTSQGSCRWRIRATAENGASSASTSQIDMVRNREGVFTAKQSKVVVLWDLDNKPPRGPPYEAAMALKRVAQRFGQVVDMSAYANRHAFIHLPQWVVEERRERRQLDILERKGLFTPSESYVCGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMRSLKGKKRQRYKEKFVSGNHKYNEAARSLITPKVGYGLASELRRAGVFVKTVEDKPQAADWALKRQMQHSMSRGIDWMFLVSDDSDFSEMLRKAKEANLGTVVVGDRDRALGRHADLWVPWMGVENGDVTEEDLVPKRWRTRRTEEDLDEDDGFSVSRYYGEVESGNDLESVVQELASASTEFNGFRISAFSEGEDDDEWVEDDVASEYLLEMSDEEDGYF 415
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1028662 1029909 - Carg26312-RA Car09g00206 153943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00206 415 Coils Coil 180 200 - -
Car09g00206 415 ProSitePatterns Zinc finger C2H2 type domain signature. 162 183 IPR013087 -
Car09g00206 415 ProSiteProfiles Zinc finger C2H2 type domain profile. 160 188 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00206 Car-Chr9:1028662 Car16g00998 Car-Chr16:8444016 5.93E-71 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4043 None None None None Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00206 - - csv:101206044 702.205