Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00237 ATGAGTTGCAGCGGCTGCAGAGTGCTTCGAAAGGGCTGCAACGAAGCTTGCGTTCTAAGGTCCAGTCTCCACTGGATTCATTCGCCGGAAGCCCAGGCCAACGCCACCTTGTTTCTCGCTAAATTCTTTGGCCGTAGTGATCTCTTGTCCTTCATCGCCGCCGTCCCCCATCATCAAAGACCTGCTCTGTTTCAGTCTCTGTTATTCGAGGCTTGCGGCCGCACCGTCAACCCAGTTAGCGGCGCCGTTGGTCTCTTGTCCAGCGGGAACTGGCACGTCTGTCAGCTGGCGGCGGAAACCGTTCTCAGCGGCGGAGTTCTCCGCCCCATACCCGGAATCGAACTTTCGGGAAATCCCACGCGCAACGTCGATGATTCCTCCCTTACTTCCAATACCGATGTCTGGACCACCACCGGACAAAATCTTCAACTCTACCCATCCACTCCGTCGGATTTCCGGTGCCTCCCTGATCTCGCCGTCGCCGCCGGAAGAGCGAAGAATCATACCCTGGAGAATCGGCGGTCTCTAGATTCCGAAGACTCGATCATGACCAGCTTCGGAAGCGGCGACCGGCGGAAACAGAGGAAGCTTTTAAATTTATTCATCTGA 609 55.99 MSCSGCRVLRKGCNEACVLRSSLHWIHSPEAQANATLFLAKFFGRSDLLSFIAAVPHHQRPALFQSLLFEACGRTVNPVSGAVGLLSSGNWHVCQLAAETVLSGGVLRPIPGIELSGNPTRNVDDSSLTSNTDVWTTTGQNLQLYPSTPSDFRCLPDLAVAAGRAKNHTLENRRSLDSEDSIMTSFGSGDRRKQRKLLNLFI 202
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 1307442 1308120 - Carg21784-RA Car09g00237 153974
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car09g00237 202 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
Car09g00237 202 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Event-related genes


Select Gene_1 Gene_2 Event_name
Car01g01399 Car09g00237 CCT
Car01g01399 Car09g00237 ECH
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00237 Car-Chr9:1307442 Car14g00743 Car-Chr14:4170324 6.10E-48 dispersed
Car01g01399 Car-Chr1:12199842 Car09g00237 Car-Chr9:1307442 9.48E-113 wgd
Car03g00839 Car-Chr3:6795366 Car09g00237 Car-Chr9:1307442 7.34E-61 wgd
Car07g00582 Car-Chr7:2957023 Car09g00237 Car-Chr9:1307442 2.85E-59 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4045 PF03195 LOB 1.60E-24 No_clan Car TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00237 - - csv:101208953 343.969