Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00244 ATGGAAAATTATTTGAACGAGAATTTCGGTGAAGTAAAGCCGAAGAAAACGTCGGAAGAAGCGCTTCAGAGATGGAGGCAGCTTTGCTGGTTGGTGAAGAATCGGAAACGGAGGTTTCGATTTACTGCCAATCTATCTAAACGATTTGAGGCCGATGCTATTAGACGCTCCAATCAGAATGAGGCAGATGAAAGGCTCGTCAATTTGAAATTGTTAGCCTGGTGTTTCCCTTGGGTTGATATCATGGGATCTTCTGAGAAGTTTAGAGTTGCAGTTTTGGTTTCACAAGCAGCGCTTCAGTTCATCAATGGGTTGGATTTGTCTCCTGACTACGTTGTGCCTGAAGAGGTCAGGCAAGCAGGTTTTGAAATCTGTGCAGATGAAGCGGGCTCCATTGTTGATGGACATGACGTGAAGAAGCTGAAGATTCATGGGGGTGCTGAGGGTATTGCAACTAAGCTTGGCACATCAACGGAGACAGGCATTCCTACTACAGACCATTTGATCAAGAAAAGACAACACATTTATGGAATTAACAAATTCACCGAAAGCCCACCTCGAGGATTTTGGCTCTTTGTTTGGGAAGCTCTCCAGGATACGACCCTCATGATACTCGCTTTCTGTTCTGTTGTTTCCCTTTTTGTTGGCATAGTGATGGAAGGATGGCCAAAGGGTGCTCATGATGGGCTTGGCATTGTTGCGAGTATCTTGCTTGTTGTATTTGTCACTGCCACCAGTGACTATAGGCAATCGCTTCAGTTCATGGATTTGGACAGGGAAAAGAAGAAAATTAACGTTCAGGTTACCAGAAATGGGCTGAGACAAAAGATTTCTATATACGAACTTCTTCCTGGTGATATTGTTCATCTTGCCGTGGGTGATCAGGTACCAGCAGATGGACTTTTCGTTTCGGGGTATTCTCTTCTGATAAATGAATCTAGTTTAACAGGTGAGAGCGAACCTGTTAACGTAAGCTCTCAAAATCCTTTCCTCTTGTCCGGAACAAAGGTTCAGGATGGTTCGTGTAAGATGGTTGTGACTTCTGTTGGCATGAGAACCCAATGGGGCAAACTGATGGCCACTCTTAGTGAAGGTGGAGATGATGAGACTCCTTTGCAGGTAAAGCTCAATGGGGTGGCAACAATTATTGGTAAAATAGGCCTGTTTTTTGCTGTCATAACTTTCGCTGTATTGGTTCAAGGACTGTTCACTCGCAAGCTACAAGAAGGGTCTTACTTGAGCTGGTCCGGAGATGAAGCAATGGAAGTTTTGGAATTCTTTGCTGTCGCCGTAACTATTGTTGTGGTTGCAGTGCCTGAAGGGCTGCCTTTGGCAGTGACACTGAGCCTTGCTTTTGCCATGAAAAAGATGATGAACGATAAGGCACTTGTCAGGAACTTGGCTGCTTGTGAGACAATGGGATCAGCTACTACTATTTGTAGTGACAAAACTGGGACATTGACGACTAACCACATGACTGTTGTGAAAGCCTGCATATGCAGCAAGGTCAAGGAAGTTAGCAATTCTAGCAAATGTTCCGATTATCGTTCGGAGCTTCCCGATTCCGCTGTTGATATTTTACTACAATCAATATTTAACAACACTGGTGGAGAAGTCGTCAAGAACAAAGATGGCAAGAATGAGATACTTGGGACGCCCACGGAGTCTGCTCTACTGGAATTCGGCCTTCTGCTTGGTGGGGATTTCCAAGAAGAACGCCAAAAGTCAAAAATCGCGAGAGTCGAGCCCTTCAATTCTGTGAAGAAGCGAATGGGGGTTGTTTTGGAGCTCCCGGCCGGTGGCTTCCGCGCGCACAGCAAAGGCGCATCAGAGATAGTTTTAGCTTCATGCGATAAAGTTCTTGACTCCAACGGTGAAGCAATTCCTCTCAATGAAGAGTCCACCGACTTTTTGAAGGAAACCATCGAAGAATTTGCGGGTGAAGCTCTTCGAACTTTGTGCCTGGCTTATATGGACATTGAAGGCGATTACAAGTCTGAAAGTACGATTCCCGCTAGTGGCTACACGTGCATAGGAATTGTTGGTATCAAGGATCCCGTTCGTCCGGGTGTTAAGGAGTCCGTTGCAATTTGCAAGGCCGCCGGTATTACCGTACGGATGGTTACGGGAGATAACATCACCACCGCCAAAGCAATTGCCAGGGAATGTGGGATTTTGACTGACGATGGTATAGCAATTGAAGGTCCTGAATTCCGGGAGAAAAAGGAGGAAGAATTGAGTGAAATAGTACCAAAAATTCAGGTTATGGCTCGATCTTCACCAATGGATAAACATACCCTTGTAAAGCACTTACGAACCACTTTTCAAGAAGTCGTTGCAGTTACAGGGGATGGAACAAATGATGCTCCGGCACTCCACGAAGCAGATATTGGATTAGCTATGGGCATTGCTGGAACTGAGGTTGCAAAAGAGAGTGCTGATGTAATAATTCTCGACGACAACTTCTCTACAATTGCTACTGTTGCTAAATGGGGGCGTTCAGTCTACATAAATATCCAAAAGTTTGTCCAGTTTCAGTTAACAGTGAACGTGGTTGCACTTCTTGTCAATTTTTCTTCAGCCTGTTTGACAGGAAATGCTCCCCTCACTGCTGTGCAACTGCTTTGGGTGAACATGATAATGGACACACTCGGAGCACTTGCATTGGCAACTGAGCCTCCTACTGATGACTTGATGAAGAGATTGCCAGTTGGTCGGAAAGGAAATTTCATTAGCAATGTGATGTGGAGAAATATATTAGGGCAGTCATTATATCAGTTTGTTATAATTTGGTATCTCCAAACAAGAGGACAGGCTCTTTTTCATCTTGATGGCCCCGACTCTGGATTGATATTAAATACACTGATTTTCAATGCATTCGTCTTTTGTCAGGTTTTCAATGAGATAAGCTCAAGAGACATGGAAAAGATAAATGTGTTTGAAGGAATATTGAAGAACTACGTGTTTGTGGTAGTGCTTGCTTGCACTGTCCTTTTCCAGATCATTATCATCCAATACCTGGGAACATTTGCGAACACCTATCCTCTTAACTTCCAGCAATGGTTTGTCACCGTGTTATTTGGATTTCTTGGCATGCCAATTGCAGCAGCTTTGAAGATGATTCCGGTAGGATCAGACTGA 3141 44.35 MENYLNENFGEVKPKKTSEEALQRWRQLCWLVKNRKRRFRFTANLSKRFEADAIRRSNQNEADERLVNLKLLAWCFPWVDIMGSSEKFRVAVLVSQAALQFINGLDLSPDYVVPEEVRQAGFEICADEAGSIVDGHDVKKLKIHGGAEGIATKLGTSTETGIPTTDHLIKKRQHIYGINKFTESPPRGFWLFVWEALQDTTLMILAFCSVVSLFVGIVMEGWPKGAHDGLGIVASILLVVFVTATSDYRQSLQFMDLDREKKKINVQVTRNGLRQKISIYELLPGDIVHLAVGDQVPADGLFVSGYSLLINESSLTGESEPVNVSSQNPFLLSGTKVQDGSCKMVVTSVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVITFAVLVQGLFTRKLQEGSYLSWSGDEAMEVLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRNLAACETMGSATTICSDKTGTLTTNHMTVVKACICSKVKEVSNSSKCSDYRSELPDSAVDILLQSIFNNTGGEVVKNKDGKNEILGTPTESALLEFGLLLGGDFQEERQKSKIARVEPFNSVKKRMGVVLELPAGGFRAHSKGASEIVLASCDKVLDSNGEAIPLNEESTDFLKETIEEFAGEALRTLCLAYMDIEGDYKSESTIPASGYTCIGIVGIKDPVRPGVKESVAICKAAGITVRMVTGDNITTAKAIARECGILTDDGIAIEGPEFREKKEEELSEIVPKIQVMARSSPMDKHTLVKHLRTTFQEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKESADVIILDDNFSTIATVAKWGRSVYINIQKFVQFQLTVNVVALLVNFSSACLTGNAPLTAVQLLWVNMIMDTLGALALATEPPTDDLMKRLPVGRKGNFISNVMWRNILGQSLYQFVIIWYLQTRGQALFHLDGPDSGLILNTLIFNAFVFCQVFNEISSRDMEKINVFEGILKNYVFVVVLACTVLFQIIIIQYLGTFANTYPLNFQQWFVTVLFGFLGMPIAAALKMIPVGSD 1046
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1342769 1348186 - Carg21777-RA Car09g00244 153981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00244 1046 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Car09g00244 1046 Pfam haloacid dehalogenase-like hydrolase 678 796 - -
Car09g00244 1046 Pfam Cation transport ATPase (P-type) 541 620 - -
Car09g00244 1046 Pfam Cation transporter/ATPase, N-terminus 145 212 IPR004014 -
Car09g00244 1046 Pfam Cation transporting ATPase, C-terminus 867 1041 IPR006068 -
Car09g00244 1046 Pfam E1-E2 ATPase 263 458 - -
Car09g00244 1046 ProSitePatterns E1-E2 ATPases phosphorylation site. 482 488 IPR018303 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01394 Car09g00244 CCT
Car01g01394 Car09g00244 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car05g01101 Car-Chr5:10576093 Car09g00244 Car-Chr9:1342769 1.69E-20 dispersed
Car09g00244 Car-Chr9:1342769 Car12g00873 Car-Chr12:8608357 0 dispersed
Car12g01065 Car-Chr12:10418655 Car09g00244 Car-Chr9:1342769 9.30E-19 dispersed
Car01g01394 Car-Chr1:12157382 Car09g00244 Car-Chr9:1342769 0 wgd
Car03g00827 Car-Chr3:6730670 Car09g00244 Car-Chr9:1342769 0 wgd
Car07g00570 Car-Chr7:2892947 Car09g00244 Car-Chr9:1342769 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00244 K01537 - csv:101221694 1860.88