Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00262 ATGGGTGATCTTGAAAACGACGAAATGGGTTTTCGAAATTCAAACGAGGGGTTACTCAATTGTTCATCTTCCGACAAAATTCCAGGAACAATGGCGATGGGGTCTTTCTTTGGGTCTGGTTGGGATCCAATGGTTTCTTCCCATGGCGAATTTTCAAATTCTTTTCCTGTTGTCTTGGAGAGCCATGGTGGGAGTGGGACGACACAGGGTGTTCATTATCCGACAGATTTGGGGTTTGGCAATGGGAATTATTCCGACATGTTTGGTTCTTTTGGTGTTTCCGGGCAGATTCTTGGTGGGTGTTCTTCCAATTACAGAAATGGAGGAACCACAGAGAAGTTATTACCACCATCAGGTGAAGAAACTGCTGCAGGATCACCAAATGGTAAACAAAGAAAACGAGCCCTTGACTCCACTTTCCCATTTAGCCAACCAAACAAGAAATCTGAAGTGAAATTGAAGAAGGATGTTTCTGGAGACAGTTCCAGTACACAGGAAGAGAAGAACGCAGAAATGGAGCAGAAATTAGGTGGTAAGGCAACTGGAAAACAAGCTAAAGAGAAGAACAATGATAGCACAGAAGCTCCCAAGGAGAATTACATTCATGTGCGAGCCAGAAGAGGGCAAGCCACAAACAGCCATAGCCTTGCTGAGAGGGTGAGGAGGGAGAAGATTAGTGAGCGGATGAGATTGCTTCAAGAGCTTGTTCCTGGATGCAACAAGATTACTGGAAAGGCTGTAATGCTTGATGAGATTATCAACTATGTTCAGTCACTGCAACAGCAGGTTGAGAGCCAGACACCGGGTGGTGTGCCAGCGAGGACGCTGGGCTCCAAAGGAGGGTGGATTGTGAGATCCCACTTTTTGTCAATGAAACTTGCTACTGTCAACCCGGACGTGAACGTCGATATCGAAAGGATTTTATCCAATGATATTTTCCACACACGAGGCAGCAACGGAACTGTTCTTGGATATGATCCCGGGTTGAGCGCGGTTTCCCCGGTCCCTCCTCACCGAATATTTCAGCTTCAGGGGACGATGTCAAATATGCCAACCACCACCACATTCACACAGTTTCCTCCTTTGCCTCAGACCGTGTTAGAAAGCGATATTCAAAGTCTTCTTCAAATGGGATTCGACTCGAGTTCGGGCACTCACAATTTGGAACCAAATGGGCGGTTTAAAGCAGAGCGCTAA 1197 46.37 MGDLENDEMGFRNSNEGLLNCSSSDKIPGTMAMGSFFGSGWDPMVSSHGEFSNSFPVVLESHGGSGTTQGVHYPTDLGFGNGNYSDMFGSFGVSGQILGGCSSNYRNGGTTEKLLPPSGEETAAGSPNGKQRKRALDSTFPFSQPNKKSEVKLKKDVSGDSSSTQEEKNAEMEQKLGGKATGKQAKEKNNDSTEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVESQTPGGVPARTLGSKGGWIVRSHFLSMKLATVNPDVNVDIERILSNDIFHTRGSNGTVLGYDPGLSAVSPVPPHRIFQLQGTMSNMPTTTTFTQFPPLPQTVLESDIQSLLQMGFDSSSGTHNLEPNGRFKAER 398
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1434733 1437204 + Carg21759-RA Car09g00262 153999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00262 398 MobiDBLite consensus disorder prediction 108 199 - -
Car09g00262 398 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 209 259 IPR011598 GO:0046983
Car09g00262 398 MobiDBLite consensus disorder prediction 148 199 - -
Car09g00262 398 Pfam Helix-loop-helix DNA-binding domain 212 260 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01375 Car09g00262 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00262 Car-Chr9:1434733 Car04g02113 Car-Chr4:17212997 2.26E-47 dispersed
Car01g01375 Car-Chr1:12071042 Car09g00262 Car-Chr9:1434733 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4050 PF00010 HLH 4.10E-06 No_clan Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00262 - - cpep:111797605 672.159