Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00284 ATGTCGAGAATGAAACATCTTCTTCGAAAGCTTCACATCGGTGGGGGATTTAATGAGCACCAGCGATTGAATGATGCTCGACCTGTGACGCGACCCAGTTCGAGCCCCAGTCCAGGCCCAAGCCCCAATAGTAATCCATCTGGTTCATCTTCTTCTGGGTCATCCTCGTCTCTGTCTATGGCGGCTTCCACTACAATGGGGAGAATGGAGGCCGTTGAATCAGTCGTTGATCAGGTGACTTCTGGGGATGTGGGCGATGCGTGCGTGGATTTCAATGCCTTGGAGGAGGAGTTTCAGGTACAATTGGCTATGGCGATTAGCGCTTCCGATCCTGATTCGAGACAGGACACTGAATCCGCTCAGATCGATGCCGCCAAGCGGATGAGTCTTGGCTGTTCGCCTTCAATCTCCGGCAGTCAAGCTCTTGCCGAATTTCTCTCACTTCAGTATTGGAGCTATAATGTTGTAAATTATGACGAAAAAGTGATGGATGGATTTTATGACTTATATGGCATTACTACAAATTCTAGCACCCGAGGAAAGATGCCACTGTTAGTCGATCTTAAAGAAATATGTGTGACAAGTGATATTGATTATGAAGTGATTTTGGTTAACCGCTTGCTTGATTCCGAGCTCCAACGTTTGGAAAGACAAGCATATAACATATTCATGGAATGTAGAGTTTCTGAGTATGGCTTCATTTTAAGTGGACTGGTTCAAAAAATTGCTGATCTAGTCGTGGCTAGAATGGGTGGTCCGGTTGGTGATGCTGAAGAAATGTTGAGAAGGTGGACCCTCAGGAGTTATGAAATGCGTAGTTCTCTGAACACGATTATTCTACCACTCGGTCGTCTTGATATTGGACTTGCACGTCATCGAGCTTTGCTTTTCAAGGTACTAGCTGATAGGATTAATCTTCCATGCATACTTGTCAAAGGAAGCTACTACACTGGTACCGATGACGGAGCTGTGAACATGATCAAAATTGATAATGGAAGTGAATATATTATTGATCTTATGGGTGCTCCAGGCACGCTAATTCCCTCAGAGGCACCCAGCTGTCAATTTTCGAATTATAGCTTTGATAGGAGGCCTGCAGATGTTATCGAAATTCCTGAAGATACGACAGTGTTACAAAATGAAGGATCTGAAGCGGTGTCGATGGCATCTACTCAAGATGAAGTAGCAAATATTTGCAACTTAATATCCAAAGAAGCTTCAGATTTAGATGCTCAATCAAAAGAAAATATTAGGAGCTTCATTGAAGAAATTCAAGCTGGGAGTTCTGACTATGATTTTGGGAAGCTTCTAGAATTAGAAAGCCGCGCGTGTGAAAATTCATCAGGTGCATGTGATCAGTCCGCATCTGCACAAAAGAAGAAAGTGAAAAAAGTGTCGAAGTATGTCATAAATGCTGCAAAGAACCCAGAGTTTGCTCAGAAATTGCATGCTGTCTTGTTAGAAAGTGGTGCATCACCTCCTGCAGATTTGTTTTCAGATATAGGCTCCCAGGGTAATGGTGAAAGCAAAGCAACTTTCCAAATGTATCCAATTGATGGAAAAGGCGTAGACGTTGGGCTTCAGTGCCACCCTTATATTTTAGCAAGCCACGGACAGTCTTCTGCTACTTCTACTGAATCAGAGTTTTTTAACAATGTTGTCCATGGAAATAAGCAGAACGTGTCTGCTGAGGGATCATCTGAAGAACAAACACCCGAGGCAAATGCAAACAAGCACACCATTTTTTGGCCCCACAATATGGAAAACAACAGATTTGTGTTCGTCGATGTTAATGGAGAAACAGGCAAATTGGCTGATGTTAATGGAACTTTTCATCGTGAGCACGTGGATGGTGTTTCGTTGGCATCCGATGCTGACTCTCATAACAGACAATTAGGAAGTGTCTTCGTGAGTGAAGAAAGAAGATTTTTGAAAGATAAGAGTGGTGGAACTCTTCAGTGCTTCGATTTGCGTGAAAATCTGCATGACAATTTGTTAGAAATTGATAATGGTAACCAGCGTGCTAGTGATGTCCGCAGTGAGACAATTGACCCAATATTAGGTGAGGTTGCAGAATGGGAAATTCCTTGGGAGGATCTTCACATTGGTGAACGTATTGGTATTGGCTCATATGGCGAGGTTTATCGAGCAGATTGGAATGGCACTGAAGTTGCTGTGAAGAAGTTCTTGGACCAAGATTTGTCTGGTGCTGCTTTAGTTCAATTAAAGTGTGAAGTTGAAATCATGTTAAGACTGAGGCATCCTAATGTCGTCCTTTTCATGGGAGCAGTCACTCGCCCTCCACATTTCTCTATCCTTACAGAGTTTCTACCCAGGGGAAGTTTGTATAGGTTACTGCATCGTCCCAACTCTCAACTCGATGAAGGGAGACGATTGAAAATGGCTCTTGATGTGGCCAAAGGAATGAACTACTTGCACACAAGTCATCCCACCATTGTCCATAGAGATCTAAAATCTCCCAATCTGCTTGTTGATAAAAACTGGGTTGTCAAGGTTTGTGATTTCGGTTTGTCACGTGTCAAGCAGAACACATTTCTGTCTTCAAAGTCGACTGCTGGAACGCCTGAATGGATGGCACCAGAAGTTCTAAGGAACGAACCAGCCAACGAGAAGTGCGATGTGTATAGTTTTGGTGTGATACTGTGGGAGTTGACGACATGCTGCATACCATGGAAAGGTTTGAACCCAATGCAGGTTGTAGGAGCTGTTGGATTCCAGAATAGGCGACTGGAGATTCCAGACAATGTTGATCCTGCAGTTGCACAGATCATTTGCGATTGTTGGCAAACGAACTCGCAACTGAGGCCGTCGTTCTCTCAGCTTATTACTCGACTGCGACGCCTTCAACGGCTTGTTCAGGAAACAAACTCCGAGAATCAAATGTCGGAGTGA 2913 43.8 MSRMKHLLRKLHIGGGFNEHQRLNDARPVTRPSSSPSPGPSPNSNPSGSSSSGSSSSLSMAASTTMGRMEAVESVVDQVTSGDVGDACVDFNALEEEFQVQLAMAISASDPDSRQDTESAQIDAAKRMSLGCSPSISGSQALAEFLSLQYWSYNVVNYDEKVMDGFYDLYGITTNSSTRGKMPLLVDLKEICVTSDIDYEVILVNRLLDSELQRLERQAYNIFMECRVSEYGFILSGLVQKIADLVVARMGGPVGDAEEMLRRWTLRSYEMRSSLNTIILPLGRLDIGLARHRALLFKVLADRINLPCILVKGSYYTGTDDGAVNMIKIDNGSEYIIDLMGAPGTLIPSEAPSCQFSNYSFDRRPADVIEIPEDTTVLQNEGSEAVSMASTQDEVANICNLISKEASDLDAQSKENIRSFIEEIQAGSSDYDFGKLLELESRACENSSGACDQSASAQKKKVKKVSKYVINAAKNPEFAQKLHAVLLESGASPPADLFSDIGSQGNGESKATFQMYPIDGKGVDVGLQCHPYILASHGQSSATSTESEFFNNVVHGNKQNVSAEGSSEEQTPEANANKHTIFWPHNMENNRFVFVDVNGETGKLADVNGTFHREHVDGVSLASDADSHNRQLGSVFVSEERRFLKDKSGGTLQCFDLRENLHDNLLEIDNGNQRASDVRSETIDPILGEVAEWEIPWEDLHIGERIGIGSYGEVYRADWNGTEVAVKKFLDQDLSGAALVQLKCEVEIMLRLRHPNVVLFMGAVTRPPHFSILTEFLPRGSLYRLLHRPNSQLDEGRRLKMALDVAKGMNYLHTSHPTIVHRDLKSPNLLVDKNWVVKVCDFGLSRVKQNTFLSSKSTAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTCCIPWKGLNPMQVVGAVGFQNRRLEIPDNVDPAVAQIICDCWQTNSQLRPSFSQLITRLRRLQRLVQETNSENQMSE 970
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1532056 1539665 - Carg21737-RA Car09g00284 154021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00284 970 Pfam Ethylene-responsive protein kinase Le-CTR1 143 347 - -
Car09g00284 970 MobiDBLite consensus disorder prediction 44 64 - -
Car09g00284 970 ProSitePatterns Protein kinases ATP-binding region signature. 706 728 IPR017441 GO:0005524
Car09g00284 970 ProSiteProfiles Protein kinase domain profile. 700 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00284 970 MobiDBLite consensus disorder prediction 13 64 - -
Car09g00284 970 Pfam Protein tyrosine and serine/threonine kinase 700 952 IPR001245 GO:0004672|GO:0006468
Car09g00284 970 Coils Coil 945 970 - -
Car09g00284 970 ProSitePatterns Serine/Threonine protein kinases active-site signature. 819 831 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00070 Car-Chr2:453277 Car09g00284 Car-Chr9:1532056 6.58E-77 dispersed
Car09g00284 Car-Chr9:1532056 Car13g00831 Car-Chr13:8993799 5.45E-80 dispersed
Car20g00185 Car-Chr20:1028580 Car09g00284 Car-Chr9:1532056 4.10E-79 dispersed
Car10g00915 Car-Chr10:6521820 Car09g00284 Car-Chr9:1532056 8.13E-39 transposed
Car12g00824 Car-Chr12:7932155 Car09g00284 Car-Chr9:1532056 4.16E-69 transposed
Car01g01352 Car-Chr1:11967808 Car09g00284 Car-Chr9:1532056 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89075 PF07714 PK_Tyr_Ser-Thr 1.90E-64 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00284 K04424 - csv:101214554 1639.01