Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00291 ATGGGGGGTTCTGGGAAATGGAGGAAGGTCTTTACAGGACAGAGGAAGTCTGAGAAGGACGACAATGAGAAGTTGTGTAGTAAAACTAAGAAATGGAGGCTATGGAGGAGCCCTTCAGGGGATTTGAGCTCTGTATGGAAGGGTTATAAAGGGGCACATAAAGCAGCTTCTGAAGGCTCTGATTCTCCTCGTGCGCCTGATTCTTTTACTGCCGCCGTCGCCGCTGTCCTCCGTGCTCCGCCCAAGAATTTCAGGGTTGTCCGCCAAGAATGGGCTGCAATTCGGATCCAAACTGCATTTCGTGGTTTCTTGTCTAGGAGGGCTCTTAGAGCCTTGAAGGGAGTGGTGAGGCTTCAAGCTCTGGTGAGGGGTCGTCTGGTGAGGAAGCAGGCAGCTATTACACTGAGGTGCATGCAGGCACTGGTTAGAGTCCAAGCTCGTGTCCGAGCGCGTCATGTGAGGATGTCGGTTGAGGGGCAGGCTGTGCAGCAATTGCTTAATGAACATCGCAGCAAGGCTGATCTCCTAAAGCAAGCTGAGGAAGGTTGGTGTGATAGCAAAGGGACAATGGAAGATATCAAAGCTAAGTTACAAATGAAGCAATATGGAGCATTTAAGAGGGAAAGAGCGATTGCTTACTCTCTTGTTCAGAAGCAATTGAAGGCAACACCAAGCTCAACTTCGCAAGTAAATGCATCGATTTACGCTCTTAAGAATTCCGAGTTCGACAAGAACAATTGGGGATGGAGTTGGTTGGAGAGATGGATGGCAGCTAAGCCATGGGAGACAATGTTGAAAGAACAATCTCGCACTGATTCCATTGAGGTCACTCCACCACCTTCAAAGAAATGTATAGAGTCTATTGTACCCAAACATTCCATAGTTTCTGAACCAAGTTTGGTGAAGATTCGGAGAAACAATGTATCCACTAGGATATCTGCTAAACCTCCCTCAAGTGGGCAAGCTCGTTCTTGTTCTAGCCCAAGTTCTGATTTCCGGTACGATGAGAGCTCTGTTTCATCTTCGATCTGCACGTCGACAACTCCTGCATCGGGGAATGTTTTCTCAACCATTGAAAGACCTGAGAATAGCAGTTATAGTAGGCCAAGTTACATGAACCCTACAGAGTCGACGAAGGTGAAGCAGAAAACAAACAGTCATTTATCGCATCGAGTTCAAAGGCAATCCATGGACGAGTATCAATTCCTTCAGAAGTCAGCAGGTTTCTCTACTGGGGATTCTAAGAGTAGTGCTGGCTCTGATTCATCAGTCAACCCCTTTAAGCCATTCATGCTGTCCACACGATTGGATAAGAATGGAACAAAGCTAAGATCATGA 1338 47.01 MGGSGKWRKVFTGQRKSEKDDNEKLCSKTKKWRLWRSPSGDLSSVWKGYKGAHKAASEGSDSPRAPDSFTAAVAAVLRAPPKNFRVVRQEWAAIRIQTAFRGFLSRRALRALKGVVRLQALVRGRLVRKQAAITLRCMQALVRVQARVRARHVRMSVEGQAVQQLLNEHRSKADLLKQAEEGWCDSKGTMEDIKAKLQMKQYGAFKRERAIAYSLVQKQLKATPSSTSQVNASIYALKNSEFDKNNWGWSWLERWMAAKPWETMLKEQSRTDSIEVTPPPSKKCIESIVPKHSIVSEPSLVKIRRNNVSTRISAKPPSSGQARSCSSPSSDFRYDESSVSSSICTSTTPASGNVFSTIERPENSSYSRPSYMNPTESTKVKQKTNSHLSHRVQRQSMDEYQFLQKSAGFSTGDSKSSAGSDSSVNPFKPFMLSTRLDKNGTKLRS 445
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1565094 1566811 - Carg21730-RA Car09g00291 154028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00291 445 MobiDBLite consensus disorder prediction 389 429 - -
Car09g00291 445 Pfam IQ calmodulin-binding motif 91 110 IPR000048 GO:0005515
Car09g00291 445 Pfam IQ calmodulin-binding motif 113 130 IPR000048 GO:0005515
Car09g00291 445 ProSiteProfiles IQ motif profile. 89 117 IPR000048 GO:0005515
Car09g00291 445 PANTHER IQ-DOMAIN 5-RELATED 1 440 - -
Car09g00291 445 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 440 - -
Car09g00291 445 MobiDBLite consensus disorder prediction 309 382 - -
Car09g00291 445 MobiDBLite consensus disorder prediction 1 23 - -
Car09g00291 445 MobiDBLite consensus disorder prediction 309 445 - -
Car09g00291 445 ProSiteProfiles IQ motif profile. 113 140 IPR000048 GO:0005515
Car09g00291 445 SMART iq_5 111 132 IPR000048 GO:0005515
Car09g00291 445 SMART iq_5 88 110 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01526 Car-Chr1:12866476 Car09g00291 Car-Chr9:1565094 2.21E-21 dispersed
Car06g00308 Car-Chr6:1710739 Car09g00291 Car-Chr9:1565094 1.00E-34 dispersed
Car09g00291 Car-Chr9:1565094 Car11g00811 Car-Chr11:4806138 1.96E-50 dispersed
Car13g00773 Car-Chr13:8631561 Car09g00291 Car-Chr9:1565094 1.08E-22 dispersed
Car18g00113 Car-Chr18:605118 Car09g00291 Car-Chr9:1565094 1.10E-21 dispersed
Car18g00808 Car-Chr18:9145038 Car09g00291 Car-Chr9:1565094 2.20E-24 dispersed
Car01g01342 Car-Chr1:11925877 Car09g00291 Car-Chr9:1565094 0 wgd
Car17g00673 Car-Chr17:6223892 Car09g00291 Car-Chr9:1565094 1.50E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00291 - - csv:101210019 754.977