Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00352 ATGCAGGCAGATCAGACGGTCATAAGTTTGAGACCAGGTGGTGGCGGTGGCCTTCGCGGAAGCAGATTTGTTACCCCTCGCTTCGATTCCTCCTCCGCTGATTCTTCGTCGCTTCGTCCACATGGCGGTGTTGCTTCAATCCTCAAGGCCGGTGATCTACGGTTCGAAGGTCGTGAGCGAATCCAGTACACTCGAGACCAGCTTCTGCAGCTTAGGGAGGTTGCAACAGTCTCTGAGGATATCATGAAGATCAAACTAGAAGTTGAGACTGAGATACTTGGGGAGGATCAAACATGGGCTCGTGCTGAAAGCAATCAGCAATCACAATCTCAAGGCCGTTACTTTGAGCCGGACAGTCGAGATTGGCGTGGTCGATCAGGACAGTTACCCACCACAGAGGAAGGATCTTGGGAGGCAATTCGCGACAACAAGGACTTGACAGGACAATCTTTGCAAGACTCAAATAATAGGACTCAAGTTTCTGGTAACCAAGGGGTGGGTACTGCAGCTGCTCTTATCAAGGCTGAAGTTCCTTGGTCAGTTAGAAGAGGTAATATCTCAGAAAAGGATCGTGTTTTGAAGACAGTAAAAGGTATACTCAATAAATTGACTCCAGAAAAGTTTGACGTACTCAAAGGTCAATTGATTGACTCTGGAATTACATCTGCTGATATTTTGAAGGATGTTATTTCACTTATATTTGAGAAGGCCGTGTATGAGCCCACATTTTGCCCTATGTATGCACTTCTGTGCTCCGACCTTAATGAGAAGCTTCCTTCATTTACATCTGATGTGCCTGGGGAGAAAGATATCACTTTTAAACGAGTTCTCTTAAATATTTGCCAAGAAGCGTTTGAAGGTGCTGATAACCTGAGGGCAGAAATCAGGCAGATGACTAATCCTGATCAGGAAATGGAAAGAAGAGATAAAGAAAGAATGGTTAAGCTTCGAACTCTAGGAAACATTCGCCTGATAGGTGAGCTTCTGAAACAGAAGATGGTGCCTGAAAAGATTGTTCACCATATTGTTCTGGAACTGTTGGGGCCTGACCCCAAAATATGCCCTGCTGAGGAGAATGTTGAGGCTATTAGTCATTTTTTTAACACAATAGGTAAGCAACTGGATGAGAGCCCAAAATCTCGGCGAGTCAATGATTTGTATTTCAGCCGATTGAAGGAGCTCACTGCAAACACCCAACTAGCACCTAGGTTGAGATTTATGGTCCGTGATGTTCTTGATTTACGGGCCAATAAATGGGTACCTAGACGTGAAGAGGTGAAAGCAAAAACCATCACTGAAATTCATTCTGAGGCTGAAAAGAATTTAGGGCTTCGTCCGGGTTCGACTGCAATGATGAGAAATGGCCGTAATGCTGAGGCACTTGGGGGTCCTGGTGGTTTTCCTGTTGCTGGACCTGGGTTTGGGGGTATGATGCCTGGAATGCCTGGAACCAGGAAAATGCCTGGTATGCCTGGACTTGATTCAGACAATTGGGAGGTTCCTAGATCCCGATCAATGCCAAGGGGCGAAAGCGGAGGTCATACTCAGGCTTCTTCGCGTGTCCAGTCATCACTAGTTGGCAAAACACCTTCCATTAATTCTAAATATTTACCTCAGGGAAGTGGTGGTGTAATAACTGGGAAAACAAGTGCTTTGCTACAGGGTAGCGCTGCTGCATCTCCTGCCCGACCAAGTTTCGTGCCTGGAACACAGCCTGTCGCCCACAACCCTAAACCAGTTGCATCAGTCATACCTTCTCCTCAGAAGCCTACAGCTCCTTCTGTAGTATCCAATTCTGCTGATCTTCACAAGAAAACCGTTTCGCTGCTCGAGGAATACTTCAGCGTACGGATTCTTGCTGAAGCTCTACAGTGTGTAGAGGAGCTGAAAGCCCCAGCTTATCACCCAGAGGTTGTTAAAGAATCCCTTATCATAGCACTTGAAAAGATTCCACCATGTGTAGACCCAGTTGTTAAGCTTCTTGAGCACTTGCTTCACAAGAATGTCTTTACTGCAAAGGATATTGGCACGGGGTGCCTTCTATATGGGTCATTGATGGATGATATCGGCATCGATCTACCGAAGGCACCAAACAATTTCGGTGAGATTCTTGGGAAGCTAATATTGATCGGGGGCCTGGATTTTGCGGTCGTGAAGGAGATTCTTAAGAAGATGGAAGATAACTACTTCCAGAAATCCATTTTTGGTGGTGCTATGAAGAGCCTCAACTCTAGCCCTTCTGGAGAGGGAATTCTGGCGACTCAAAGTGCTGAGATCCAGGCATGTGAAACTTTACTTGCATGA 2304 46.14 MQADQTVISLRPGGGGGLRGSRFVTPRFDSSSADSSSLRPHGGVASILKAGDLRFEGRERIQYTRDQLLQLREVATVSEDIMKIKLEVETEILGEDQTWARAESNQQSQSQGRYFEPDSRDWRGRSGQLPTTEEGSWEAIRDNKDLTGQSLQDSNNRTQVSGNQGVGTAAALIKAEVPWSVRRGNISEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKDVISLIFEKAVYEPTFCPMYALLCSDLNEKLPSFTSDVPGEKDITFKRVLLNICQEAFEGADNLRAEIRQMTNPDQEMERRDKERMVKLRTLGNIRLIGELLKQKMVPEKIVHHIVLELLGPDPKICPAEENVEAISHFFNTIGKQLDESPKSRRVNDLYFSRLKELTANTQLAPRLRFMVRDVLDLRANKWVPRREEVKAKTITEIHSEAEKNLGLRPGSTAMMRNGRNAEALGGPGGFPVAGPGFGGMMPGMPGTRKMPGMPGLDSDNWEVPRSRSMPRGESGGHTQASSRVQSSLVGKTPSINSKYLPQGSGGVITGKTSALLQGSAAASPARPSFVPGTQPVAHNPKPVASVIPSPQKPTAPSVVSNSADLHKKTVSLLEEYFSVRILAEALQCVEELKAPAYHPEVVKESLIIALEKIPPCVDPVVKLLEHLLHKNVFTAKDIGTGCLLYGSLMDDIGIDLPKAPNNFGEILGKLILIGGLDFAVVKEILKKMEDNYFQKSIFGGAMKSLNSSPSGEGILATQSAEIQACETLLA 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1924537 1929539 + Carg02832-RA Car09g00352 154089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00352 767 MobiDBLite consensus disorder prediction 101 115 - -
Car09g00352 767 Pfam MA3 domain 603 713 IPR003891 -
Car09g00352 767 Pfam MIF4G domain 193 418 IPR003890 GO:0003723|GO:0005515
Car09g00352 767 MobiDBLite consensus disorder prediction 25 39 - -
Car09g00352 767 ProSiteProfiles MI domain profile. 601 723 IPR003891 -
Car09g00352 767 MobiDBLite consensus disorder prediction 1 43 - -
Car09g00352 767 MobiDBLite consensus disorder prediction 497 540 - -
Car09g00352 767 MobiDBLite consensus disorder prediction 101 134 - -
Car09g00352 767 MobiDBLite consensus disorder prediction 509 540 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01290 Car09g00352 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00352 Car-Chr9:1924537 Car10g00422 Car-Chr10:2117841 0 dispersed
Car01g01290 Car-Chr1:11635799 Car09g00352 Car-Chr9:1924537 0 wgd
Car02g00864 Car-Chr2:6197969 Car09g00352 Car-Chr9:1924537 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00352 K03260 - csv:101211356 1250.34