Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00362 ATGGCCCTATTTCGCAAGTTCTTTTATCGGAAGCCACCGGACGGGCTGTTAGAGATATCCGAAAGGGTTTATGTTTTCGATAGCTGCTTTACGACGGAGGTATTGGAAGAGGATGAATACAAGGTCTATATTGGAGGCATTGTAGGAAAGCTTCGTGAGAGTCTCACCGACGCTTCGTTCATGGTGTTTAATTTTCGAGAAGGGGAGGGTCATAGCCTCATTACGAATATATTATCTGTATTTGATATGACGGTCATGGATTATCCGAGACAATATGAAGGCTGCCCTCTACTCACCATGGAGATGATCCACCACTTCTTAAGATCCAGTGAAAGCTGGCTCTCACTTGGGCAGCAAAATGTACTTTTGATGCATTGCGAAAGAGGGGGGTGGCCTGTCTTGGCTTTCATGTTGGCCGCTCTTCTGATTTACAGGAAGCAATACGCAGGGGAGCAGAAAACTTTGGACATGATTTACAAGCAAGCGCCTCGGGAGCTTTTGCAGTTGATGTCACCTCTTAACCCGTTGCCTTCACAGTTGAGGTATCTTCAATATGTATCAAGGAGAAATGTGGGCTCGCAATGGCCTCCGCTCGACAGGGCGCTCACTCTAGACTGCATTATTATTAGATTGATTCCTAATATGGATGGGGAGGGTGGTTGTCGCCCAATATTCAGGATATATGGACAGGATCCCTTTTTGGTGGCGGATCGAACTTCCAAAGTATTGTTCTCAACCCCCAAAAAGAGTAAACTTGTTCGTCAGTTTAAGCAGGTAGATTGTGAACTACTTAAAATTGATATCCATTGCCATATACAAGGTGATGTTGTTCTTGAATGTATAAGTTTGGACAATGATCTGGTAAGGGAGGAGATGATGTTTCGGGTTATGTTTAACACAGCATTTATAAGGTCAAATATTTTGATGCTTAACCGTGACGACATTGATATCGTATGGCATGCAAACGATCAATTTCCAAAGGATTTCCGAGCAGAGATTCTTTTCTCAGAGATGGATGCTTCCGCATCACTTGTTTCAATTGAATTGCCAAATATTGAGGAGAAAGATGGCCTTCCGATTGAAGCATTTGCTAGAGTTCAAGAGATCTTTAGCACTGAGGACTGGCTAAGCCCAAAGGCTAATGCAGCTCTTAATATGCTCCAGAAAATAACAGCTACGAATTTTCTTACAGAGAAACTGGCTAGTTCCAGCCCTTTAGAGAGAACCGAGATGCTCGACTTATCTCTTGATAAACTAGCTATGGAATCAGAGACAATGGAAGACGATGTTATAAGTCCCCGATCGAAGATGGATACAAATCAATATCAGCCTTCTTTTGAACTATCCCACGCTGCAAGTTCAGCGAGATCAAAGATTGAACCCCCAGAATTGCAGGTTGCTCTCCAACTACCAGTTCAGTCTAAAATCATCACCCAACGAGTACCTGAACCTCCATTGTCGACACCAGACTCCTTCCCTAGTTCTGTGCAAGGTTCACCTCGTGCAATATTAAGATATCACAGTGCACCCTCAGCTCTTGGCATTACAGCTTTATTACATGATCATTCCACATTTAGTGGTAAAGAAGTCCTACAACCAACAATGTCTTCACCATCATCTGGTCTGTTGAGTATGCGTGCTCTAGATTCCCTGAAAGACATTCAACCTAGTAAGCTTCCTATTTTGCCAACTTCAACCATTACTGATCCGTTGACACTTCACCAACGTTCCTTGAAACCTCTAAAATTTTCACATCCTCAACCTCCTCAAACCGCTCCACGGGGGAGAAGTCAATTGTCACCTTCTTCATCTCAACCAACACCTACCTCTTTTCGTCGGGAGTCCCCACCCTCTTTCAATGAGAGTGAACCTTCAAGATCCTCTTCTAAGGAATCATTTTCTGTTCCCATTCATCCCTCACCTTCGGCTTTAGTAACATCTCTATGTACTAGTAGGACGAATGGTTCGTTTTCCCCACCCGCACCACAACCTCCTTCTACGACAGTACTGTTATCCTCTACGAAGAACTTGACGAGTGCCTCTACCCTTCCCTTCCCTCCTCCTCCTCCTCCTCCATGTTGTACCCCTAACTTGGGTGCTAGTGTTGTCTCGCCAACATCAGTGCCCCGACCCCCACCTCCACCTCCTTCATTGAAGGACTCTATAATCACAGTCATGCATGATCCCCGATCTCCACCTCTCGCCCCACCCTTGCCTCCATCTTTTTTGAGTTCAACACCTACTTGTGATTCTACTATCACACCTCCTCCTAGTCTTGCACCACAAGATTCTGCCACGGTAGTTAGGAACTCAACGGTTGTACCTAGCGCTCCACCTCCCCCACCTCTCCCATCTCATTCTTCTTCAAGTCCTAGTACTATATCTTCAGTGCCACCCCCGCCACCCCCTCCTAGTCTTGCACCAAATGTCTCTGCCCCCCCTCCTCCTCCTCCACCACCTTTTGCAAATTCTGGATCCACCTTATGTTCAGGTGCTGTAACGTCAGCTCCACCTGCTCCACCTCCTCCAGGTTTTTCAATGAAGGAGTCTGCAACACATGCTCCACCTGCACCCCCTCCCCCAGGTCTCAACGGTAATAAACTTTCAAATGTCAATGGTACTTCCTCACAGTCTCACGTTGGCACTAACAACAGCAACATACCTTCTATTCCTGGACCACCTTCCAGTGGTCTATTCAGTGCAAAGGCACGATGCATTGGACGTTTGAACTCCAAAAACCAGTCTCAACCTAAAAGGTCCAATTTGAAGCCTTATCACTGGTTAAAATTAACGAGGGCCATGCAAGGAAGCTTGTGGGCAGAGACACAAAAAAGTGATGAAGCTTCCAAAGCTCCGGAGTTTGACATGTCCGAACTTGAAAGTCTTTTCTCTGCAGCTGCACCAAATTCAAAATCTGGAGGTTTGGGTGGAAATTCAAATCGCCCAGCCTCAGGGCCGAAATCAGAGAAAGTTCAATTGATTGAACTTCGACGGGCATATAATTGCGAAATTATGCTCTCTAAAGTTAAGATTCCTTTGCCCGATATGATGTGTTCAGTACTTGCATTGGATGAGTCGGCATTAGATGTGGATCAGGTTGAGAACCTAATCAAGTTTTGTCCAACAAAGGAAGAAATGGAATTACTTAAGGGGTACAGTGGGGATAAGGAGAACTTGGGAAAATGTGAACAGTTCTTTTTAGAATTGATGAAAGTCCCACGAGTAGAGTCGAAGCTAAGGGTTTTTTCTTTCAAGATACAATTCCATTTGCAGGCCTCTGACCTTAGAAATAATCTGAACACTATCAATTCGACATCTGATGAGATCAGAAGTTCGGTAAAGTTGAAAAGGGTAATGCAAACTATCCTTTCGTTGGGTAACGCTTTGAACCACGGAACGGCTAGAGGTTCGGCGATTGGATTTCGGCTTGATAGTCTCCTCAAACTCACTGATACACGAGCGAGGAACAACAAGATGACTCTCATGCATTATCTATGTAAGGTGCTTGCTGAAAAGCTGCCAGAACTTTTAGATTTTCCAAAGGACCTTGTGAGTTTGGAAGCTTCTACAAAGATACAACTGAAATATTTGGCAGAGGAAATGCAAGCCATAAGCAAAGGGCTGGAGAAGGTCGTTCAGGAATTGGCTAATTCCGAGAACGACGGGCACGTTTCAGAAAATTTTTGTCAGACTTTAAAAAACTTCCTTTCTCATGCTGAGGCCGAAGTGAGGTCTCTTGCCTTTCTTTATTCTAATGTGGGTAGAAATGCTGATGCACTCGCTCTTTATTTCGGCGAAGATCCAGCACGTTGCCCTTTCGAGCAAGTTGTTTCTACACTGTTCAATTTCGTGAGGATGTTCGTGCGAGCGCATGAAGAAAACTGTAAGCAGCTTGATTATGAAAAGAAGAAAGCACAGAAGGAAGCTGCAGAAAAGGATAAGTTGAAGGTCAGTACCCCGAAAAAGGAGTCACGATTCTTCATGCAGACACCAACCTAG 3999 44.76 MALFRKFFYRKPPDGLLEISERVYVFDSCFTTEVLEEDEYKVYIGGIVGKLRESLTDASFMVFNFREGEGHSLITNILSVFDMTVMDYPRQYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYAGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYVSRRNVGSQWPPLDRALTLDCIIIRLIPNMDGEGGCRPIFRIYGQDPFLVADRTSKVLFSTPKKSKLVRQFKQVDCELLKIDIHCHIQGDVVLECISLDNDLVREEMMFRVMFNTAFIRSNILMLNRDDIDIVWHANDQFPKDFRAEILFSEMDASASLVSIELPNIEEKDGLPIEAFARVQEIFSTEDWLSPKANAALNMLQKITATNFLTEKLASSSPLERTEMLDLSLDKLAMESETMEDDVISPRSKMDTNQYQPSFELSHAASSARSKIEPPELQVALQLPVQSKIITQRVPEPPLSTPDSFPSSVQGSPRAILRYHSAPSALGITALLHDHSTFSGKEVLQPTMSSPSSGLLSMRALDSLKDIQPSKLPILPTSTITDPLTLHQRSLKPLKFSHPQPPQTAPRGRSQLSPSSSQPTPTSFRRESPPSFNESEPSRSSSKESFSVPIHPSPSALVTSLCTSRTNGSFSPPAPQPPSTTVLLSSTKNLTSASTLPFPPPPPPPCCTPNLGASVVSPTSVPRPPPPPPSLKDSIITVMHDPRSPPLAPPLPPSFLSSTPTCDSTITPPPSLAPQDSATVVRNSTVVPSAPPPPPLPSHSSSSPSTISSVPPPPPPPSLAPNVSAPPPPPPPPFANSGSTLCSGAVTSAPPAPPPPGFSMKESATHAPPAPPPPGLNGNKLSNVNGTSSQSHVGTNNSNIPSIPGPPSSGLFSAKARCIGRLNSKNQSQPKRSNLKPYHWLKLTRAMQGSLWAETQKSDEASKAPEFDMSELESLFSAAAPNSKSGGLGGNSNRPASGPKSEKVQLIELRRAYNCEIMLSKVKIPLPDMMCSVLALDESALDVDQVENLIKFCPTKEEMELLKGYSGDKENLGKCEQFFLELMKVPRVESKLRVFSFKIQFHLQASDLRNNLNTINSTSDEIRSSVKLKRVMQTILSLGNALNHGTARGSAIGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELANSENDGHVSENFCQTLKNFLSHAEAEVRSLAFLYSNVGRNADALALYFGEDPARCPFEQVVSTLFNFVRMFVRAHEENCKQLDYEKKKAQKEAAEKDKLKVSTPKKESRFFMQTPT 1332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1972665 1981152 + Carg02842-RA Car09g00362 154099
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00362 1332 Pfam Formin Homology 2 Domain 914 1287 IPR015425 -
Car09g00362 1332 ProSiteProfiles C2 tensin-type domain profile. 199 338 IPR014020 -
Car09g00362 1332 Coils Coil 1288 1308 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 590 657 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 580 899 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 744 773 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 967 986 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 1307 1332 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 682 696 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 967 988 - -
Car09g00362 1332 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Car09g00362 1332 MobiDBLite consensus disorder prediction 794 823 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 667 681 - -
Car09g00362 1332 ProSiteProfiles Formin homology-2 (FH2) domain profile. 912 1313 IPR015425 -
Car09g00362 1332 MobiDBLite consensus disorder prediction 865 893 - -
Car09g00362 1332 MobiDBLite consensus disorder prediction 1307 1321 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car01g01277 Car09g00362 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00362 Car-Chr9:1972665 Car10g00196 Car-Chr10:937448 2.76E-176 dispersed
Car07g00682 Car-Chr7:3482492 Car09g00362 Car-Chr9:1972665 7.98E-07 transposed
Car11g01110 Car-Chr11:8814536 Car09g00362 Car-Chr9:1972665 4.68E-07 transposed
Car12g00563 Car-Chr12:3766505 Car09g00362 Car-Chr9:1972665 1.77E-07 transposed
Car01g01277 Car-Chr1:11572988 Car09g00362 Car-Chr9:1972665 0 wgd
Car10g00436 Car-Chr10:2176912 Car09g00362 Car-Chr9:1972665 0 wgd
Car02g00851 Car-Chr2:6133121 Car09g00362 Car-Chr9:1972665 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00362 - - csv:101214019 1874.37