Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car09g00364 | ATGGAGGAGAGGCATGTTCTGTTTGGTAAATATGAGATTGGGAGGTTGCTTGGGAAGGGGACTTTTGCTAAGGTCTATTATGGAAAAGAATTGGAGTCTGGAGAAAGTGTAGCGATTAAGGTTTTAAACAAGGATCAGGTCAAGAAGGAAGGGATGATGGAGCAGATCAAGCGCGAGATCTCCGTTATGCGTCTTGTTCGTCATCCAAACATTGTTGAGTTGAAGGAAGTAATGGCGACGAAGACGAAGATCTTCTTCGTTATGGATTATGTTCGCGGTGGTGAGCTTTTTGCCAAAGTTGCAAGAGGAAGACTCAAGGAAGATGTGGCTCGGAAGTATTTCCAGCAGTTAATCAGTGCCGTCGATTACTGTCATAGTCGTGGAGTTTCTCACCGCGATTTGAAGCCGGAGAATCTTTTGCTGGATGAGAACGAAGATCTCAAGATCTCCGACTTTGGACTCTCCGCTCTACCGGAACAGCTTCGGAACGATGGTCTTCTCCACACGCAGTGCGGGACTCCGGCCTACGTCGCACCGGAAGTACTAAGAAGAAAGGGCTACGATGGAGCCAAAGCCGATATCTGGTCTTGCGGTGTGATTTTGTATGTTCTGTTAGCAGGATTCCTTCCGTTTCAGGATGAGAACATCATGACTATGTATAAGAAGGTTTTCAAGGCCGAATTTGAATGTCCGCCATGGTTCTCCGCTGAAGCGAAGCGTTTGATTTCAAAAATCCTCGTCGTAGATCCAGAAAGACGAATCACAATCGGAGCAATCACGCGAGTTCCTTGGTTCCGCAAAGATTTCTCGAGATCGCTCTCGTTCACGATGAAAGAATTAGTCACAGCGAAAACAGAGGATTCCGATTCCGAGAGTCCAAAACTATCGACGCCAAAATTCTTCAATGCGTTCGAGTTCATATCGACGATGTCATCGGGATTCGATCTATCGAGCTTATTCGAAAACAAAAGGAAGACGGGATCCATTTTCACATCGAGATGCTCAGTGTCGACGATCATGGAGAAAATCGAGACGGTGGCGAAGAGACTGAGCTTCAAGGTCTCGGAAGTGAAAGACTTCAAGCTCCGGCTGCAAGGTCCGGGGGAGGGGCGAAAAGGAAAGCTATCTGTGACGGCGGAGGTGTTCGAAATAGCGCCGGAAGTTGCCATAGTCGAATTTTCAAAGTCGGCCGGGGATACTCTGGAATATTCGAAGTTCTGTGAAGAAGACGTTCGGCCGGCGTTGAAGGACATCGTTTGGACGTGGCAAGGTGATTGTGTCCCCACCGGTGACGGACGTCACGGCCAACTTGACGGCGACGGCTTTTTGTGA | 1332 | 48.27 | MEERHVLFGKYEIGRLLGKGTFAKVYYGKELESGESVAIKVLNKDQVKKEGMMEQIKREISVMRLVRHPNIVELKEVMATKTKIFFVMDYVRGGELFAKVARGRLKEDVARKYFQQLISAVDYCHSRGVSHRDLKPENLLLDENEDLKISDFGLSALPEQLRNDGLLHTQCGTPAYVAPEVLRRKGYDGAKADIWSCGVILYVLLAGFLPFQDENIMTMYKKVFKAEFECPPWFSAEAKRLISKILVVDPERRITIGAITRVPWFRKDFSRSLSFTMKELVTAKTEDSDSESPKLSTPKFFNAFEFISTMSSGFDLSSLFENKRKTGSIFTSRCSVSTIMEKIETVAKRLSFKVSEVKDFKLRLQGPGEGRKGKLSVTAEVFEIAPEVAIVEFSKSAGDTLEYSKFCEEDVRPALKDIVWTWQGDCVPTGDGRHGQLDGDGFL | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1988779 | 1990110 | - | Carg02844-RA | Car09g00364 | 154101 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car09g00364 | 443 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 90 | - | - | |
Car09g00364 | 443 | SMART | serkin_6 | 11 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car09g00364 | 443 | Gene3D | Kinase associated domain 1, KA1 | 296 | 421 | - | - | |
Car09g00364 | 443 | ProSiteProfiles | Protein kinase domain profile. | 11 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car09g00364 | 443 | PANTHER | - | 1 | 430 | - | - | |
Car09g00364 | 443 | ProSitePatterns | Protein kinases ATP-binding region signature. | 17 | 40 | IPR017441 | GO:0005524 | |
Car09g00364 | 443 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 25-RELATED | 1 | 430 | - | - | |
Car09g00364 | 443 | Gene3D | Transferase(Phosphotransferase) domain 1 | 91 | 271 | - | - | |
Car09g00364 | 443 | ProSiteProfiles | NAF domain profile. | 296 | 321 | IPR018451 | GO:0007165 | |
Car09g00364 | 443 | CDD | CIPK_C | 302 | 416 | - | - | |
Car09g00364 | 443 | Pfam | Protein kinase domain | 11 | 265 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Car09g00364 | 443 | CDD | STKc_SnRK3 | 10 | 264 | - | - | |
Car09g00364 | 443 | Pfam | NAF domain | 298 | 355 | IPR004041 | GO:0007165 | |
Car09g00364 | 443 | SUPERFAMILY | Protein kinase-like (PK-like) | 7 | 290 | IPR011009 | - | |
Car09g00364 | 443 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 129 | 141 | IPR008271 | GO:0004672|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car09g00364 | Car-Chr9:1988779 | Car13g00481 | Car-Chr13:7049770 | 2.29E-178 | dispersed | |
Car14g00954 | Car-Chr14:5778599 | Car09g00364 | Car-Chr9:1988779 | 0 | transposed | |
Car01g01275 | Car-Chr1:11561646 | Car09g00364 | Car-Chr9:1988779 | 0 | wgd | |
Car10g00439 | Car-Chr10:2206179 | Car09g00364 | Car-Chr9:1988779 | 0 | wgd | |
Car02g00850 | Car-Chr2:6128779 | Car09g00364 | Car-Chr9:1988779 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
89080 | PF00069 | Pkinase | 2.60E-75 | CL0016 | Car | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car09g00364 | - | - | csv:101213773 | 827.78 |