Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00371 ATGACGGTTGAGCCTAGAATCGATGATCCAAATGACCAATTTCCGATTGGAATGCGTGTTCTCGCCGTTGACGATGATCCTACTTGTCTTTTGATCTTGGAGACTTTGCTTTGTCGATGCCAGTATCACGTGACTACAACTAATCAGGCTATTATGGCACTCAAGTTACTGAGAGAAAACAAGAACAAGTTTGACGTGGTTATCAGTGATGTCCACATGCCTGACATGGATGGATTTAAGCTGCTAGAGCTTGTTGGACTGGAGATGGACCTGCCTGTTATTATGCTCTCTGCAAATGGAGATCCCAAACTTGTGATGAAAGGAATTACTCATGGAGCGTGCGATTACTTGTTGAAACCTGTTCGCATCGAGGAGCTAAGGAACATTTGGCAGCATGTAATCAGGAGAAAGAAATTCGATCCGAAGGACCGAATAAATTCTGGCAATCAGGACAAGGTTGATTCTGAGAATGGTGAAGAAGCAGCCGATCCAAATGGGAAATTTAATAAAAAAAGAAAGGACCAGAACTATAATGATGATGATGACCAGGACTATAATGAGCAAGAGAATGACGACGCATCGACCCAGAAGAAGCCTCGTGTTGTTTGGTCCGTGGAGCTGCATAGGAAGTTTGTCAATGCTGTTAACCAGTTGGGCATAGACAAGGCAGTGCCTAAAAAGATTTTGGATTTGATGAACGTCGAAAAGCTCACAAGAGAAAACGTAGCTAGTCATCTCCAGAAATACAGGCTTTATCTAAAGAGAATCAGCTGTGTGGCAAACCAGCAAGCTAACATGGTGACAGCATTGAGCAGCGGAGATCCTTCTTATTTGAGAATCGGTTCTCTGAGCGGCATTGGGAATTTCCATTCTTTGACTGGACCTCCGCAGTTTCCGAACACTGCTTATAGATCCATCCCAACGACTGGGATGCTCGGTCGATTGAATACTCCTGCTTGTATGGGTATGCACGGCCTTTCGTCCCCAGGAACAGTTAAACTGGGTAATATGAACAATTCAAACAATGATCAATCCACATTTCAGCCAATCATGCTTTCTGGAAACCGCAGTGGGAATATTTTCCAGGGAATTCCTGAGCCATCAGAACTTGATCAACTACAACATGTTAAGCACGGGACCCATGTGGACAATCTCTCTTCTGCTTTTGATGAGAGAACAGTATTTCCTGCCTCCATTGGCCTACCAAATGCAAACATGTCTTCTGGAACTTTGAGTAATCCTCTTTTAGGATTAGCTAATGATCCCATGATTTCAGAAGTTCAGCATCATGAAGTGAATGTTGGCAGAAAATTTGGATCTCAATCTTCGATTTCGGTACTATCTTCAACTTCCGAAAGCTCACGTCCTTCGCTCGATAATCTTAGATGCACTGGTGAGAATTGGCCGAAAGCTGTTCATTCATCTCGGGTCCACTTGAATACAATTCCATCTAGCAACCTTTCGAATATTGCTACTTCCTACCATAGTCAGTTGAGAGACAATACTACCAGTGCATTGCATATAGGAAATTGTCTTTCTGACATTTCGTCTATTACTTCAATATCTACTCCGTCCCATGATTCGAGAACAGATTCTCAACGACAAGGAGCCACAACTAGCAACAGATATAATCAAATGATCTCAAAGGTTCCTGTTCAAGATTGGAATGATCACAAACAGGATGCCTATTGCCACACAACTATGGCCTGTAGTTCATCAAATTCTTTGATACCAGTGAATGGTGCTGCAGAGACTTTGCCCAAGCATTTGGAAAATCAGAACACCTTCTCTGGTAGCAAGGATTTCAATGTGACTAATCAAGCAATTGTTCTTGATCATGCAATGATGGAACATGATAGATTCAAGAAATCCACAATGGAGACATCGCTCATGTTGAAACAAGGTTACCTGTACGATCATCAGCAAAAGATGCAACCCAGATTCTCTTCAAGTAACTGCGGCTCCTTGGAAGACATAGCTTGTGCCATGATGAAAGAGGAACAAGATGATGGAAAATTATTGGAAGGGGACTTTGGATGTGATAATTATCCCATTGGAACATGCATGTGA 2070 42.46 MTVEPRIDDPNDQFPIGMRVLAVDDDPTCLLILETLLCRCQYHVTTTNQAIMALKLLRENKNKFDVVISDVHMPDMDGFKLLELVGLEMDLPVIMLSANGDPKLVMKGITHGACDYLLKPVRIEELRNIWQHVIRRKKFDPKDRINSGNQDKVDSENGEEAADPNGKFNKKRKDQNYNDDDDQDYNEQENDDASTQKKPRVVWSVELHRKFVNAVNQLGIDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVTALSSGDPSYLRIGSLSGIGNFHSLTGPPQFPNTAYRSIPTTGMLGRLNTPACMGMHGLSSPGTVKLGNMNNSNNDQSTFQPIMLSGNRSGNIFQGIPEPSELDQLQHVKHGTHVDNLSSAFDERTVFPASIGLPNANMSSGTLSNPLLGLANDPMISEVQHHEVNVGRKFGSQSSISVLSSTSESSRPSLDNLRCTGENWPKAVHSSRVHLNTIPSSNLSNIATSYHSQLRDNTTSALHIGNCLSDISSITSISTPSHDSRTDSQRQGATTSNRYNQMISKVPVQDWNDHKQDAYCHTTMACSSSNSLIPVNGAAETLPKHLENQNTFSGSKDFNVTNQAIVLDHAMMEHDRFKKSTMETSLMLKQGYLYDHQQKMQPRFSSSNCGSLEDIACAMMKEEQDDGKLLEGDFGCDNYPIGTCM 689
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2032866 2037554 - Carg02851-RA Car09g00371 154108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00371 689 MobiDBLite consensus disorder prediction 521 541 - -
Car09g00371 689 ProSiteProfiles Response regulatory domain profile. 19 134 IPR001789 GO:0000160
Car09g00371 689 MobiDBLite consensus disorder prediction 141 197 - -
Car09g00371 689 Pfam Myb-like DNA-binding domain 200 250 IPR001005 -
Car09g00371 689 MobiDBLite consensus disorder prediction 141 179 - -
Car09g00371 689 Pfam Response regulator receiver domain 20 129 IPR001789 GO:0000160
Car09g00371 689 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car06g01314 Car-Chr6:9404028 Car09g00371 Car-Chr9:2032866 3.08E-75 dispersed
Car08g01126 Car-Chr8:7621855 Car09g00371 Car-Chr9:2032866 1.50E-102 dispersed
Car09g00371 Car-Chr9:2032866 Car14g01419 Car-Chr14:11919856 2.41E-104 dispersed
Car17g00322 Car-Chr17:2014483 Car09g00371 Car-Chr9:2032866 2.41E-42 dispersed
Car20g00562 Car-Chr20:3091599 Car09g00371 Car-Chr9:2032866 2.81E-18 dispersed
Car08g00859 Car-Chr8:5737675 Car09g00371 Car-Chr9:2032866 6.06E-12 transposed
Car01g01266 Car-Chr1:11487480 Car09g00371 Car-Chr9:2032866 8.05E-37 wgd
Car11g00369 Car-Chr11:2025765 Car09g00371 Car-Chr9:2032866 2.53E-42 wgd
Car12g01145 Car-Chr12:11098431 Car09g00371 Car-Chr9:2032866 4.90E-119 wgd
Car02g00843 Car-Chr2:6081581 Car09g00371 Car-Chr9:2032866 1.81E-135 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
4057 PF00072 Response_reg 3.60E-22 CL0304 Car TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00371 - K14491 csv:101215220 1197.96