Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00410 ATGGAAGCAAATGCGGGCCTGGTGGCTGGATCTTACAAGAGGAATGAGCTTGTTCGGATTCGCCACGATTCCGATAGTGGGCCTAAACCTCTGAAGAATATGAACAGCCAAACATGTCAAATATGTTGCGACACAGTTGGTCTTACTGCCTCCGGTGACGTCTTTGTTGCTTGCAATGAATGTGCGTTTCCCGTTTGTCGTCCGTGTTATGAGTATGAGAGAAAAGACGGGAACCAGTCTTGCCCTCAGTGCAAGACTAGATACAAGAGGCACAAAGGGAGTCCTCGTGTCGATGGTGATGATGATGAAGATGATGTGGATGACATTGAGAATGAGTTTAATTACGTCCAAGGAAGTAGCAAAACAAAACGACATTGGCAAGGGGAAGATGCTGAACTATCGACCTCTGCGAGACATGAATCTCAACAGCCCATACCACTCCTTACCAATGGCCAATCAGTTTCGGGCGAAATTCCTTGTGCTACCCCTGACAATCAATCGGTGCGAACCACATCTGGTCCTCTGGGTCCTCCAGAAAAGCATATGCACTCACATCCATATGTCGACCCACGGCAGCCAGGTATGAAGAAGCTCGAGTTTTTCATGATCTTTAAGGAAGCATTTTTTGTTGCTTCGGGTTTGAACTAA 648 46.91 MEANAGLVAGSYKRNELVRIRHDSDSGPKPLKNMNSQTCQICCDTVGLTASGDVFVACNECAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPRVDGDDDEDDVDDIENEFNYVQGSSKTKRHWQGEDAELSTSARHESQQPIPLLTNGQSVSGEIPCATPDNQSVRTTSGPLGPPEKHMHSHPYVDPRQPGMKKLEFFMIFKEAFFVASGLN 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2268869 2274909 - Carg02891-RA Car09g00410 154147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00410 215 MobiDBLite consensus disorder prediction 161 189 - -
Car09g00410 215 ProSiteProfiles Zinc finger RING-type profile. 39 85 IPR001841 -
Car09g00410 215 MobiDBLite consensus disorder prediction 74 142 - -
Car09g00410 215 Pfam Zinc-binding RING-finger 29 106 IPR027934 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00410 Car-Chr9:2268869 Car02g00866 Car-Chr2:6208790 7.88E-45 dispersed
Car04g01268 Car-Chr4:7351698 Car09g00410 Car-Chr9:2268869 1.44E-114 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00410 K10999 - csv:101205724 382.104