Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car09g00415 | ATGGGATTATTAGGGAGATCGATGTGCGGGAGAGAGGATCAACGAGAGCTTGAGCACTTATCGAGAGACGACGGCAGCCAATACAGCCTCACGGGCGGAATCCTGCCGCCGCTTGGCGTGAATGGGCGAAATAATCGAAGAAGCAAACTCGGTCCTCATATAATCTCGCCGTTCGATTACAATTACAGATTTTGGGAGACGTTTCTGATTTTCTTGGTACTCTACACAGCCTGGGCATGTCCGTTTGAGTTCGGGTTTCTCCCTTCGCCCAGCGGAGTTCTGGCAATAATTGACAATATCGTAAATGGACTTTTCGCCATTGATATAGTTCTGACATTCTTCGTGGCGTATTTGGACAAAACGACTTACCTGCTGGTGGATGACCGGAAGCTGATTGCTCTACGGTATGCCAAAACCTGGTTGGTCCTCGACGTTGTGTCCAATATTCCGTCGGAGATGGCTCGCAATATTCTCCCTCCTTCCCTTCAGGTTTATGGCTACTTCAACATGCTTCGTCTATGGCGTCTTCGAAGAGTCAGCTCCATGTTCGCCAGGTTGGAAAAAGACAGGAACTACAACTATTTCTGGGTTCGATCTGCAAAGCTTATGTTTGTGTGTCTGTTCACAGTTCATTTTGCTGGCTGCTGCTTCTATCTAATTGATTCAAACTATAAGGACCCCAAAAGAACATGGTCGACCTTATACATGGAAGACTTCCATAATGAAAGTTTGTGGGTGCGTTATGTGACTTCCATTTACTGGTCAATTGTCACAATCACCACCACTGGCTATGGCGATTTGCATCCAATCAATGATCAAGAGATGTCATTTGTCATTTGTTATCTGTTCTTCATTCTGGGGTTGCAATCTTACCTGATTGGAAATATGACAAACTTGGTCGTCCATGGCACGAGTCGAACCAGGCAATTTAGAGACACCATTCAAGCTGCCTCAAATTTCGCCCAAAGAAATCAACTGCCTGGTCGGCTGCAAGAACAGATGCTAGCTCATCTGTGTTTGAAATTCAGGATTGATTCAGAGGGTTTACAACAGCAAGAGACAATTGATTCTCTTCCAAAAGCCATTAGATCCGGCATCGCACACCATCTCTTCTATTCACTCGTTGATAGTGCTTATTTGTTCAATGGGGTGTCAACCGACTTGATCTTTCAACTGGTGACAGAAATGAAGGCTGAGTACTTTCCTCCCAAAGAAGATATCATCTTGCAGAATGAAGCACCAACAGATTTCTATATAGTTGTCACTGGCACTGCGGATCTTATTGTACAAAGAAATGGAATAGAAGAGATCGTCGGAGAAGCAAAGACAGGAGATGTCATTGGTGAGATTGGCGTGCTTTGTTATCAACCACAACTGTTTACAGTTCGAACCAGCCGTTTGAGTCAACTGTTGCGATTGAATCGCTCTTCGTTTTTCAACTTAGTACAAGCTAGCGTTGGGGATGGGACAATAATAATGAACAATCTCCTTAAGCACCTGAAGGAGGTAAAAGACCCAATGATGGAGGAAATTCTGCAAGAAACAGAACAGTCCTTGATTCGTGCTGGAATGGAAATGCCTCTCAATTTATACTTTGCGGCAAGCAGTGGCGATGACTTATTGTTGCATCAGTTGCTAAAGCGTGGTTCAAACCCAAATGAAGTAGATGAGGGTAGCGGGAAGACAGCACTTCATATTGCAGCTGCTAAAGGAAACGAACACTGCGTAGTTCTACTCCTAGAGTATGGGGCAGATCCGAACCGAAGAGACTTTGAAGGAAGCCTACCCTTGTGGCAAGCAATACAAGGAAATCATGAGCCTATAGTCAAGCTTCTAATAGACAATGGTGCCGATATTTCTTCAGGAGACGTCGCCCAGTTTGCATGCACCGCTGTGGAGCAAAACAACATAGATATGCTCACATCCATCATCGAATGTGGTGGAGATGTAACTCTGCCTAGAAGCAACGGGACTACAGCTCTTCACACGGCAGTATGTGAAGGAAACAGTGAAATGGTTAAGTTCCTTTTAGAGCATGGGGCTGACATTGATAAGGCAGATGTTCATGGATGGACTCCACGAGCGTTAGCAGATCATCAAGGCCATGAAGAGATAAAAGAACTATTCTCTCTTAAGCAAGCTGTGAATAAATCATCTGTTGTCCATATTCCACAAAATCCCGAATCAAATTATCTACGGAAGTTCCAGAGCGAGTCGATCATACCGCGGTTTTCCCATGACTCCTGCATGACTCCTGTTCGAGAATCAAATTGTTCTGATATGCCTCCTAGAAGGAGAAGGAGCAATAATTATCGAAACTCGCTCGTTGGGTTCATGGAAAATACCAATAAGGGTGAAAGGGACGTTCTACAATCCGCATTGCTCGGTTTTAGCAATAGCCGAAGCGTGAGATCGGCTTACCAGGCAAGAGTTGTTCTCAGTTGCCCTGAGAAAGGACAAGTCATTGGAAAGCTTGTGCTTTTACCCAAAACCATCCAAGAACTAGTTGAAACTGGTTCCAAAAAATTTGGGATTTCTGCAACAATGATTTTAACTCATGAAGGAGCTGAAGTTGAGGATATAGACCTTGTCAGAGACGGTGATCACCTCATTCTTGTCGGTGATGCCAGTGCCACCGTCCCGAGTGGCCAAGTACGGTAG | 2661 | 44.76 | MGLLGRSMCGREDQRELEHLSRDDGSQYSLTGGILPPLGVNGRNNRRSKLGPHIISPFDYNYRFWETFLIFLVLYTAWACPFEFGFLPSPSGVLAIIDNIVNGLFAIDIVLTFFVAYLDKTTYLLVDDRKLIALRYAKTWLVLDVVSNIPSEMARNILPPSLQVYGYFNMLRLWRLRRVSSMFARLEKDRNYNYFWVRSAKLMFVCLFTVHFAGCCFYLIDSNYKDPKRTWSTLYMEDFHNESLWVRYVTSIYWSIVTITTTGYGDLHPINDQEMSFVICYLFFILGLQSYLIGNMTNLVVHGTSRTRQFRDTIQAASNFAQRNQLPGRLQEQMLAHLCLKFRIDSEGLQQQETIDSLPKAIRSGIAHHLFYSLVDSAYLFNGVSTDLIFQLVTEMKAEYFPPKEDIILQNEAPTDFYIVVTGTADLIVQRNGIEEIVGEAKTGDVIGEIGVLCYQPQLFTVRTSRLSQLLRLNRSSFFNLVQASVGDGTIIMNNLLKHLKEVKDPMMEEILQETEQSLIRAGMEMPLNLYFAASSGDDLLLHQLLKRGSNPNEVDEGSGKTALHIAAAKGNEHCVVLLLEYGADPNRRDFEGSLPLWQAIQGNHEPIVKLLIDNGADISSGDVAQFACTAVEQNNIDMLTSIIECGGDVTLPRSNGTTALHTAVCEGNSEMVKFLLEHGADIDKADVHGWTPRALADHQGHEEIKELFSLKQAVNKSSVVHIPQNPESNYLRKFQSESIIPRFSHDSCMTPVRESNCSDMPPRRRRSNNYRNSLVGFMENTNKGERDVLQSALLGFSNSRSVRSAYQARVVLSCPEKGQVIGKLVLLPKTIQELVETGSKKFGISATMILTHEGAEVEDIDLVRDGDHLILVGDASATVPSGQVR | 886 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2299197 | 2304669 | + | Carg02896-RA | Car09g00415 | 154152 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car09g00415 | 886 | Pfam | KHA, dimerisation domain of potassium ion channel | 810 | 872 | IPR021789 | - | |
Car09g00415 | 886 | Pfam | Ion transport protein | 63 | 307 | IPR005821 | GO:0005216|GO:0006811|GO:0016020|GO:0055085 | |
Car09g00415 | 886 | ProSiteProfiles | Ankyrin repeat profile. | 656 | 688 | IPR002110 | GO:0005515 | |
Car09g00415 | 886 | Pfam | Ankyrin repeats (3 copies) | 530 | 621 | IPR002110 | GO:0005515 | |
Car09g00415 | 886 | Pfam | Ankyrin repeats (3 copies) | 631 | 709 | IPR002110 | GO:0005515 | |
Car09g00415 | 886 | ProSiteProfiles | KHA domain profile. | 810 | 886 | IPR021789 | - | |
Car09g00415 | 886 | ProSiteProfiles | Ankyrin repeat region circular profile. | 656 | 687 | - | - | |
Car09g00415 | 886 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 380 | 482 | IPR000595 | - | |
Car09g00415 | 886 | Pfam | Cyclic nucleotide-binding domain | 400 | 484 | IPR000595 | - | |
Car09g00415 | 886 | ProSiteProfiles | Ankyrin repeat profile. | 559 | 591 | IPR002110 | GO:0005515 | |
Car09g00415 | 886 | ProSiteProfiles | Ankyrin repeat region circular profile. | 592 | 623 | - | - | |
Car09g00415 | 886 | ProSiteProfiles | Ankyrin repeat profile. | 592 | 624 | IPR002110 | GO:0005515 | |
Car09g00415 | 886 | ProSiteProfiles | Ankyrin repeat region circular profile. | 559 | 590 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Car01g01171 | Car09g00415 | CCT | |
Car01g01171 | Car09g00415 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Car09g00415 | Car-Chr9:2299197 | Car10g00536 | Car-Chr10:2688737 | 0 | dispersed | |
Car04g02857 | Car-Chr4:21644981 | Car09g00415 | Car-Chr9:2299197 | 1.14E-10 | transposed | |
Car11g00432 | Car-Chr11:2414856 | Car09g00415 | Car-Chr9:2299197 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car09g00415 | K21867 | - | csv:101217334 | 1366.67 |