Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00432 ATGACGACACCAATGTCCGAAACAAGGTCGCCGTTGCCTTTGCTGTTCCGGCGGCACTCAAGTGGCGAAATAAAGAACTTGACGTCGGTTTCCAGCAGCCTTTTGCCGGCGTTTGGAACTGTTGTGACCGATGGATACTCAAACCTGAACAAGTTCATTATAGTTCCGTATGATAGAAGATATCGGTGGTGGCAAACTTTCCTGGTAGTGCTTGTGGTGTACTCAGCGTGGGTATCTCCCTTTGAGCTTGCCTTCAAGAAAGTGGCAACTGGGTCTCTTTTACCCGTTGATTTGGTGGTGGATGCATTCTTTGCCCTTGATATTGTCTTGACCTTCTTCGTGGCTTATTTGGATAAATCCACTTATCTCCTCGTTGATGATCATAAGAAGATTGCTGTACGTTACCTTACGAGCCTGTGGTTCCCCATGGACGTAGCCTCCACTCTTCCATTTCAGGTTACATTGTTGGCAGTTCATTCAGCTGGTTGTTTCTACTACTGGCTGGCAATTCATCATAAAGATGCAGAAAATACATGGATTGGAATTGAAGTAGAAGATTTTAAAAGCAGAAGTATCTGGCTTGGCTACACCTATTCAATATATTGGTCAATTGTCACACTTGCTACCGTTGGTTATGGGGACTTGCATGCAGTTAATCTAGGGGAGAAGATTTTTAGCATCTGCTACATGTTATTCAACATCGGCCTCACGTCTTACTTGATAGGAAACATGACAAATCTCATCGTTCACAGTGCTATCCGAACATTTATCATGAGGGATTCCATAAATGAGATATTGCGTTATGGAAGCAAGAATAGACTGCCAGAAAGCTTGAAAGATCAAATGTTGGCGCACATGCAGCTCAAGTTCAAGACAGCAGAGTTGAAGCAAGAAGAGGTGTTGGAGGATTTACCTAAAGCAATCAGAACCAGTATTGCCCAGCACCTTTTCCGTCGTACAGTTGAGAATGCGTACTTATTCAAGGATCTATCTAACGACTTAATCGCACAATTGGTGTCTGAGATGAAAGCCGAGTACTTTCCACCTAAAGTTGACATTATAATACAAAACGAGATACCAACAGATTTCTACATTTTGGTGTCTGGATCAGTGGATGTGATCGTGTACAAGACTGGAACTGAACAGATTTTGTCAAAGCTGGAATCTCCACAGATGGCAGGGGAAATTGCTGTGATGTTGAATATCCCACAGCCATTTACAGTGAGAACTAGAAGACTCTCCCAAGTCATCAGGATAAGTCATCATCATTTTAAGCAAATGTTACAACCAAACAACGAAGATGGAAAAACCCTTTTCATCAACTTCACTGAGCACTTGAAGGGGATGAAAAAGGAGGAGCAAAACGAAATACCCTACTTTTCAGAGTTGCTGGAAGACCTAAATTCAGAGTTCACAGAACCGAATGAGACACAAAATCAGAGACTACCAGATTATCATGGAGATCAAGAAATGGAAGGATTGCCAGAAGCATCTACACCATTGCCACATACAGATCGCATCAGGGTGATAATTCACGACCACCATCCAGATGAAGGTACAAAAGATGCCAACAGTATGGGAAAACTGGTATTTTTGCCCAAGTCGATTGAAGGACTTTTCGGATTGGCAGAGAAAAGATTTGGCAAGAGAGGGAGCTCAATTTTCATGGCTGATGGCTCTAAAGTAGAAGACTTGAATGTTTTAAGAGAGGGTGATCATTTATTTTTTGTGTGA 1734 42.33 MTTPMSETRSPLPLLFRRHSSGEIKNLTSVSSSLLPAFGTVVTDGYSNLNKFIIVPYDRRYRWWQTFLVVLVVYSAWVSPFELAFKKVATGSLLPVDLVVDAFFALDIVLTFFVAYLDKSTYLLVDDHKKIAVRYLTSLWFPMDVASTLPFQVTLLAVHSAGCFYYWLAIHHKDAENTWIGIEVEDFKSRSIWLGYTYSIYWSIVTLATVGYGDLHAVNLGEKIFSICYMLFNIGLTSYLIGNMTNLIVHSAIRTFIMRDSINEILRYGSKNRLPESLKDQMLAHMQLKFKTAELKQEEVLEDLPKAIRTSIAQHLFRRTVENAYLFKDLSNDLIAQLVSEMKAEYFPPKVDIIIQNEIPTDFYILVSGSVDVIVYKTGTEQILSKLESPQMAGEIAVMLNIPQPFTVRTRRLSQVIRISHHHFKQMLQPNNEDGKTLFINFTEHLKGMKKEEQNEIPYFSELLEDLNSEFTEPNETQNQRLPDYHGDQEMEGLPEASTPLPHTDRIRVIIHDHHPDEGTKDANSMGKLVFLPKSIEGLFGLAEKRFGKRGSSIFMADGSKVEDLNVLREGDHLFFV 577
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2401581 2408740 - Carg02913-RA Car09g00432 154169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00432 577 ProSiteProfiles KHA domain profile. 508 577 IPR021789 -
Car09g00432 577 Pfam Cyclic nucleotide-binding domain 346 429 IPR000595 -
Car09g00432 577 Pfam KHA, dimerisation domain of potassium ion channel 508 576 IPR021789 -
Car09g00432 577 ProSiteProfiles cAMP/cGMP binding motif profile. 326 445 IPR000595 -
Car09g00432 577 Pfam Ion transport protein 61 155 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Car09g00432 577 Pfam Ion channel 156 248 IPR013099 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00432 Car-Chr9:2401581 Car11g00432 Car-Chr11:2414856 1.07E-07 dispersed
Car01g01171 Car-Chr1:10937845 Car09g00432 Car-Chr9:2401581 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00432 K21867 - tcc:18587908 787.719