Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00449 ATGACGGGGCTAACATGTAATGCTTGTAACAAAGAATTTCTAGACGCCGAGGAGCAAAAGCTTCACTACAAGTCCGAATGGCATCGATACAATCTTAAGCGCAAGGTAGCTAATGTTCCTGGGGTGACAGAGGCATTATTTTTAGCTAGACAATCTGCTGCTGCTGCACAAGAGAATGCCAAATCAAGAGAGACCTCGATGCTATACTCTTGTGGTCTTTGTAGCAAAGCTTATAGGAGTGCCCAGGCTCATGCCCAACATCTTAAATCTAGGAGTCACACTATCCGGGTTTCGCAAGGAACACATGATCAAGAAGTTGAAAAACCAATAATTAAGCCCCTTCCTCAGCGGATTTCCAATAAGGAACCCCAACAGAGTGAGGAGGAAGAGAGTGAGGAGGAGTGGGAAGAAGTTAATCCTGACGAAGAAATGATCGATGAGGGTGAGGATGAGGACGATGATATTGATGCCATTGAAGTGGACTTCGATCCATCATGCTGCTTCATGTGTGATCTAAAGCACGACACCATTGATAATTGCATGGTCCACATGCATAAGCAACATGGATTCTTTATTCCTGATGTTGAATATTTGAAGGATCCAAAAGGCTTCCTTACATACCTCGGTCTGAAGGTGATGAGGGATTTCAGGTGTCTGTACTGCAATGATAATCGTCTTCCTTTTAGCTGCTTGGAAGCTGTTAGGAAGCACATGGAAGCAAAAAGCCATTGCAAAGTGCATTATGGCGATGGAGACGAGAACGAAGAAGTAGAATTGGAGGAATTTTATGATTACAGCAGCAGTTATGTGGATGGAAGCAACCAGCTGGTACCATCAGGGGCTGGGGACAATTCTGTAGAACTTGGTAGTGGTGGAGCTGAGCTCATCTTAGTTCAAAGAACTAACGATCGACAATCGACCAAAACACTTGGTTCTAGACAATTTCTACGTTATTATCGTCAAAAGCCTCGACCGTCTCCTGCAAATGACGCGCTCTTAACTGCTGTATTGGCAGCAAGGTACAGGAGCATGGGATTGGCGACTGTCCAGTCAAGAGAAACGATGATCAGGATGAAGGTGATGAAAGAAATGAATCGAACCGGGTTGGAAGCTATGCGTACTAAGATCGGATTGAAGAACAACGTAATCCGAAACCTGCCAAAGAATGTACCACACTAG 1179 44.53 MTGLTCNACNKEFLDAEEQKLHYKSEWHRYNLKRKVANVPGVTEALFLARQSAAAAQENAKSRETSMLYSCGLCSKAYRSAQAHAQHLKSRSHTIRVSQGTHDQEVEKPIIKPLPQRISNKEPQQSEEEESEEEWEEVNPDEEMIDEGEDEDDDIDAIEVDFDPSCCFMCDLKHDTIDNCMVHMHKQHGFFIPDVEYLKDPKGFLTYLGLKVMRDFRCLYCNDNRLPFSCLEAVRKHMEAKSHCKVHYGDGDENEEVELEEFYDYSSSYVDGSNQLVPSGAGDNSVELGSGGAELILVQRTNDRQSTKTLGSRQFLRYYRQKPRPSPANDALLTAVLAARYRSMGLATVQSRETMIRMKVMKEMNRTGLEAMRTKIGLKNNVIRNLPKNVPH 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2509640 2512723 - Carg02931-RA Car09g00449 154186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00449 392 MobiDBLite consensus disorder prediction 126 148 - -
Car09g00449 392 MobiDBLite consensus disorder prediction 89 148 - -
Car09g00449 392 ProSitePatterns Zinc finger C2H2 type domain signature. 6 28 IPR013087 -
Car09g00449 392 MobiDBLite consensus disorder prediction 96 110 - -
Car09g00449 392 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 94 IPR013087 -
Car09g00449 392 Pfam C2H2 type zinc-finger (2 copies) 167 268 IPR041661 -
Car09g00449 392 ProSitePatterns Zinc finger C2H2 type domain signature. 71 93 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00970 Car-Chr9:6091326 Car09g00449 Car-Chr9:2509640 6.14E-06 transposed
Car01g01175 Car-Chr1:10963133 Car09g00449 Car-Chr9:2509640 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00449 K14816 - csv:101219700 662.144