Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00462 ATGGCTCCTAGATTGGGGTTTCTGTGTCGGTGGGGAAAAGAGAAAGATCCTCAAAAAGGAACTCCGGTGGTTGTGACCATGGAGAAGCCTAACTTCTCCGTCGTGGAGATCGACGGTCCCGACGCCGCATTCCGGCCGGTGGAGAAAAGTAGAGGCAAAAATACCAAACAGGTCACGTGGATTCTTCTTCTCAAGGCCAATCGAGCCGTCGGTTGCATAACTTGGCTTGTTACAGTTCTCTGGACATTGTTGGGAACAATCAAGAAGAGGCTGATCTACCGGCAAGGAATCGCCATTGAAGGCGGGAAGCTGGGAAGAGGGAGGTTACTGTTTGGAGTTATTAGAGTTTTCTTAGTAACTTCCATTGGGATTCTTGCTTTTGAAATGCTTGCTTATTTCAAAGGCTGGCATTACTTTCAGCATTCTAATCTGCATATTCCTCAGGCTTCTGAGTTGCAAGGATTGCTTCATTCACTCTATGTTGCTTGGTTAACTTGTAGAGCAGAGTACATTGCTCCTCTCATTCAAACACTCTCTAAATTTTGCATTGTTCTGTTCCTTATCCAATCGGTGGATCGTATGATCCTTTGTTTTGGTTGCCTATGGATAAAGTACAAGAGAATTGAACCCAAGATTGAAGGGGATCCCTTCAGGTCGGATGATGTGGAGGGAGGTGGATACAAGTATCCAATGGTTCTTGTTCAAATTCCCATGTGCAACGAACGGGAGGTTTATGAGCAGTCTATCTCTGCAGTCTGTCAGATTGATTGGCCAAGGGACCATTTACTCATTCAAGTTCTTGATGATTCTGATGATGAGAGCATCCAACTGTTAATTAAGGCTGAGGTTGCTAAATGGAGCCATAAGGGGGTTAACATAGTCTATCGCCATCGATTAGTAAGAACGGGATATAAAGCTGGGAATCTGAAATCTGCGATGAGTTGTGATTATGTTAGAGACTATGAGTTTGTTGCAATTTTCGACGCTGACTTTCAACCTAACCCGGATTTTCTTAAGCTGACCGTCCCCCATTTCAAGGATAACCCAGAGCTAGGTTTGGTCCAGGCCAGATGGTCGTTTGTGAACCGGGACGAAAACTTGTTGACACGCCTTCAAAACATTAACTTGTGTTTCCACTTTGAGGTAGAACAGCAGGTCAATGGGGCGTTCCTTAATTTCTTTGGTTTCAATGGCACTGCTGGTGTTTGGAGGATTAAGGCGCTCGAGGAGTCCGGAGGGTGGCTTGAAAGAACGACAGTAGAGGATATGGACATAGCTGTGAGAGCCCATCTTAACGGCTGGAAATTCGTATTTCTAAACGACGTTAAGGTCCTTTGTGAAGTTCCCGAGTCCTATGAAGCTTATAGGAAGCAGCAACATCGTTGGCATTCTGGTCCTATGCAACTATTCAGGTTGTCCCTTCCAGCAGTCATAAGTTCTAAGATATCAGCATGGAAGAAGGCAAATTTGATACTATTGTTCTTTCTATTAAGGAAGCTTATCCTTCCATTCTATTCCTTCACGTTGTTCTGCATAATTCTTCCTCTAACCATGTTTGTACCAGAAGCCGAGCTTCCTGTATGGGTGATCTGTTACGTGCCCGTCTTCATGTCGTTACTCAACATTCTTCCATCCCCAAAATCATTTCCTTTTATTGTCCCCTACCTTCTTTTTGAAAACACCATGTCCGTAACCAAATTCAATGCCATGGTATCTGGCTTATTCCAGTTAGGTAGCTCTTATGAGTGGATTGTGACTAAAAAGGCTGGGAGATCCTCCGAATCCGACTTACTGGCTGCTGCCGAAAGGGATTCTAAGATAACGAATCAAGCGCAGATATATAGAGGCGCTTCCGAGAGCGAGATTTCTGAGTTGACCCACTTAAAGGAGCGCAAAGAAGTCGTCTCTGCACCTGTCAAAAAAGTAAACAAGTTATATCGAAAAGAGCTAGCGCTCGCGTTTCTTTTACTTTTAGCCTCACTCAGGAGTCTCTTGGCTGCACAAGGAGTTCACTTCTACTTCTTGATGTTCCAAGGTGTGACCTTCCTCCTTGTAGGCCTTGATCTAATTGGAGAGCAAATGAGCTGA 2088 44.54 MAPRLGFLCRWGKEKDPQKGTPVVVTMEKPNFSVVEIDGPDAAFRPVEKSRGKNTKQVTWILLLKANRAVGCITWLVTVLWTLLGTIKKRLIYRQGIAIEGGKLGRGRLLFGVIRVFLVTSIGILAFEMLAYFKGWHYFQHSNLHIPQASELQGLLHSLYVAWLTCRAEYIAPLIQTLSKFCIVLFLIQSVDRMILCFGCLWIKYKRIEPKIEGDPFRSDDVEGGGYKYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDHLLIQVLDDSDDESIQLLIKAEVAKWSHKGVNIVYRHRLVRTGYKAGNLKSAMSCDYVRDYEFVAIFDADFQPNPDFLKLTVPHFKDNPELGLVQARWSFVNRDENLLTRLQNINLCFHFEVEQQVNGAFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFVFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLSLPAVISSKISAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPVWVICYVPVFMSLLNILPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLAAAERDSKITNQAQIYRGASESEISELTHLKERKEVVSAPVKKVNKLYRKELALAFLLLLASLRSLLAAQGVHFYFLMFQGVTFLLVGLDLIGEQMS 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2571021 2574545 - Carg02944-RA Car09g00462 154199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00462 695 Pfam Glycosyl transferase family group 2 324 528 IPR001173 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g01374 Car-Chr1:12066696 Car09g00462 Car-Chr9:2571021 0 dispersed
Car04g02628 Car-Chr4:20486062 Car09g00462 Car-Chr9:2571021 0 dispersed
Car09g00263 Car-Chr9:1438177 Car09g00462 Car-Chr9:2571021 0 dispersed
Car09g00462 Car-Chr9:2571021 Car15g00304 Car-Chr15:1646301 0 dispersed
Car01g01200 Car-Chr1:11087078 Car09g00462 Car-Chr9:2571021 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00462 - - csv:101217415 1298.11