Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00466 ATGTGGTTACCAAGATACGGGCTTGAGAGGAAAGAGAAACTGGATGTGAAGGGAATTGTGGCTGTGGCAATTGACAGAGACAAGGGAAGCCAAGGGGCTCTCAAATGGGCCGTTGATTATTTGCTTCAAAGGGGTCAATCAGTTTTCCTCATTCATGTCAAACTCAGATCCCCTTCTAATTCTTCCCAAAAGATGAGCTCTAAATCTGACTCTGAAGCCAGCATCAAAGAATTATTCCTTCCTTTTCGTTGCTTTTGTACTCGGAAGGATATACAATGCATGGATGTTGTGTTGGAAGATACAGATGCAGCAAAGGCCATAATTGAGTATGCAGCAAATAAGGCCATAGAGAACATTGTTATGGGCGCTTCAGCAAAATCTGGCTTCTTAAGGCATACAAACGATGTTCCTGGCAGTGTAGTAAAAGGAGCACCAGATTTTTGTAATGTGTTTGTGATTTCTAAAGGGAAAGTTCAATCGATGCGTTCGGCATCTCGTCCCGCTCCAGTGATTAGTCCTCTACGAAGTCAATTAGCTCAACAAAGCAGCACGAAATCCGATACGCCCGAGATCCAGATGACTCACTCTGCCAGTGCAAGAGGATATAATTACAAACCATCATCATATGGAGATTTACCGACGCAAGAATCGGATATATCTTTCGTTAGCTCCGGAAGACCGAGCATCGATCGTATATTTCCTTCACTTTATGATAGTCAAGATACAGGAGGAAGATCCACACCACCACAGGTTTCAAGCAGTACAGATTTTGACTTACCTCATAGCTTTGAGTCTCTACAGATGGGACGGATGTCAGCGGATATGAACTTTTCGTCCGAGTTCTCTTCGATCTCGCAAGACAGTGACAGACTTTCGATCTCGTCACAGTCTATGGAAGACGTCGAGGCCGAGATGCGGAGGCTCAGGCTAGAACTCAAGCAAACTATGGAAATGTACAGCACAGCCTGCAAGGAAGCTCTTACAGCCAAACAAAAGGCGGTCGAGCTACAACGATGGAAATTAGAAGAAGAACAGAGATTAGAGGAGGCGAGATTGGCCGGGGAAGCTGCATTGGCGCTAGCGGAACAGGAGAAGTTGAAGTCGAAAGCAGCCATCGAGGCAGCTGAAGCGGCTCGGAGAATTGCAGAATTGGAAGGACAGAAAAGAATGAAGGCTGAAATGAAAGCACTCAAAGAAGCTGAGGAGAAGAAAAAGGCAGTTGATGCATTGGCAAACAATGATATCAGGTATAGGAAGTATACAATCGACGAGATCGAAGTGGCAACGGAATTCTTTGCTGAATCTCGTAAGATCGGAGAAGGAGGCTATGGTCCTGTTTACAGGTGTGATCTTGATCATACTCCCGTTGCCATTAAGGTTCTACGTCCCGATGCGACTCAAGGACGATCGCAGTTTAAACAAGAGGTAGAAGTACTCAGCTGTATACGTCATCCGAACATGGTTCTCCTCCTCGGAGCTTGCCCCGAGTATGGCTGCTTGGTCTATGAGTACATGGCTAATGGGAGCTTAGAAGACCGACTTCTTCGACGAGGAAACACGCCACCACTTTCTTGGCAGCTCAGGTTCAAAATTGCAGCTGAAATTGGGACAGCATTGCTGTTCTTGCACCAAACAAAGCCAGAGCCTCTTGTGCACCGTGATCTCAAACCGGCTAACATTCTGCTCGATCGTAACTTTGTCAGTAAGATCAGTGATGTTGGCTTGGCTAGGCTCGTACCGCCATCGATTGCTAATAGTGTAACACAATATCGAATGACATCGACCGCTGGAACATTTTGCTACATTGATCCCGAGTATCAGCAGACAGGTATGCTTGGTGTGAAATCCGACATATACTCGCTAGGCATCATGTTTCTCCAACTGATCACTTCTAGGCCACCAATGGGATTGACTCACCATGTCGAAAGAGCTATCGAGAATGGGACGTTCGAAACTATTCTCGACCCAGCCGTCCTTGATTGGCCTATTCAAGAAGCTTTGTCTTTCGCCAAGATGTCGCTCAAGTGTGCCGAGTTACGACGTAAAGATAGGCCTGATCTTGGTAAGGCCATCCTTCCAGAGCTTAACAGGTTGAGAACTATTGCAGAAGATATAACGCACCCAACACTGATGGGGGGAGACATAAGCCCCTCTCGCAGCAACAGCCAAGTTTCTCTTCAATTTGGATCGTCACCGCAATCATACAACAGCTCGAGAAACCCATCGACGACAACTTTTTGA 2241 46.27 MWLPRYGLERKEKLDVKGIVAVAIDRDKGSQGALKWAVDYLLQRGQSVFLIHVKLRSPSNSSQKMSSKSDSEASIKELFLPFRCFCTRKDIQCMDVVLEDTDAAKAIIEYAANKAIENIVMGASAKSGFLRHTNDVPGSVVKGAPDFCNVFVISKGKVQSMRSASRPAPVISPLRSQLAQQSSTKSDTPEIQMTHSASARGYNYKPSSYGDLPTQESDISFVSSGRPSIDRIFPSLYDSQDTGGRSTPPQVSSSTDFDLPHSFESLQMGRMSADMNFSSEFSSISQDSDRLSISSQSMEDVEAEMRRLRLELKQTMEMYSTACKEALTAKQKAVELQRWKLEEEQRLEEARLAGEAALALAEQEKLKSKAAIEAAEAARRIAELEGQKRMKAEMKALKEAEEKKKAVDALANNDIRYRKYTIDEIEVATEFFAESRKIGEGGYGPVYRCDLDHTPVAIKVLRPDATQGRSQFKQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLEDRLLRRGNTPPLSWQLRFKIAAEIGTALLFLHQTKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSIANSVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQLITSRPPMGLTHHVERAIENGTFETILDPAVLDWPIQEALSFAKMSLKCAELRRKDRPDLGKAILPELNRLRTIAEDITHPTLMGGDISPSRSNSQVSLQFGSSPQSYNSSRNPSTTTF 746
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2597386 2603006 - Carg02948-RA Car09g00466 154203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00466 746 MobiDBLite consensus disorder prediction 236 256 - -
Car09g00466 746 Coils Coil 358 410 - -
Car09g00466 746 Pfam Protein kinase domain 433 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00466 746 MobiDBLite consensus disorder prediction 713 746 - -
Car09g00466 746 Coils Coil 291 318 - -
Car09g00466 746 MobiDBLite consensus disorder prediction 709 746 - -
Car09g00466 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 550 562 IPR008271 GO:0004672|GO:0006468
Car09g00466 746 Coils Coil 324 344 - -
Car09g00466 746 MobiDBLite consensus disorder prediction 164 207 - -
Car09g00466 746 MobiDBLite consensus disorder prediction 239 256 - -
Car09g00466 746 ProSiteProfiles Protein kinase domain profile. 432 710 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00466 746 MobiDBLite consensus disorder prediction 174 207 - -
Car09g00466 746 Pfam Universal stress protein family 20 131 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car02g00722 Car-Chr2:5353134 Car09g00466 Car-Chr9:2597386 2.04E-112 dispersed
Car05g00359 Car-Chr5:2077727 Car09g00466 Car-Chr9:2597386 0 dispersed
Car05g00690 Car-Chr5:4640641 Car09g00466 Car-Chr9:2597386 7.00E-20 dispersed
Car08g00664 Car-Chr8:4268001 Car09g00466 Car-Chr9:2597386 0 dispersed
Car09g00466 Car-Chr9:2597386 Car16g00601 Car-Chr16:3847962 0 dispersed
Car15g01221 Car-Chr15:9532359 Car09g00466 Car-Chr9:2597386 1.98E-137 dispersed
Car05g00562 Car-Chr5:3296013 Car09g00466 Car-Chr9:2597386 0 transposed
Car05g01318 Car-Chr5:12032700 Car09g00466 Car-Chr9:2597386 1.52E-07 transposed
Car01g01203 Car-Chr1:11104296 Car09g00466 Car-Chr9:2597386 0 wgd
Car12g00262 Car-Chr12:1752480 Car09g00466 Car-Chr9:2597386 9.54E-95 wgd
Car05g00561 Car-Chr5:3293190 Car09g00466 Car-Chr9:2597386 2.79E-67 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89084 PF00069 Pkinase 2.10E-39 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00466 - - csv:105435028 1155.97