Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00495 ATGGCGGTCGCCTCTTCCCCTCGCGAGGAGTTTGTTTACCTTGCTAAGCTTGCCGAGCAGGCCGAGCGCTACGAGGAGATGGTCGAGTTTATGGAAAAGGTCTCCGCCGCCGTAGACAACGAGGAGCTTACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCTTCCTGGAGGATTATTTCCTCCATTGAGCAGAAGGAGGAGAGCCGAGGGAACGATGATCATGTCTCGATCATCCGAGATTACAGATCCAAGATCGAGACTGAGCTGTCTAACATCTGCGATGGGATCCTTAATCTTCTTGACTCGCGCCTTATTCCCTCCGCTGCGTCCGGAGACTCCAAGGTGTTTTATCTCAAAATGAAGGGCGATTATCATAGATACCTGGCTGAATTCAAGACCGGAGCCAAGCGGAAGGAAGCTGCCGAAAGTACACTCACTGCTTATAAATCTGCTCAGGATATTGCAAATGCTGAACTTTCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTACTATGAGATTCTGAATTCCCCTGATCGGGCTTGCAGCCTTGCTAAACAGGCTTTCGACGAGGCAATTGCTGAGTTGGATACTCTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACCCTATGGACTTCGGACATGCAGGATGATGGAGATGACATCAAAGAAGCAGCTCCCAAACGCGATGACGAATATTTCTGCAGGCCTGCCTATGATTCTGTGAGGCTATCTTTTCAGTGCTCAGTTGATATCTGCGGTCAGGTCTTAAGTCTATTTAGGGGCACTTGTGATCTCATTAGAACAGGTTAG 891 49.05 MAVASSPREEFVYLAKLAEQAERYEEMVEFMEKVSAAVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSIIRDYRSKIETELSNICDGILNLLDSRLIPSAASGDSKVFYLKMKGDYHRYLAEFKTGAKRKEAAESTLTAYKSAQDIANAELSPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDDIKEAAPKRDDEYFCRPAYDSVRLSFQCSVDICGQVLSLFRGTCDLIRTG 296
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2767971 2770813 + Carg02977-RA Car09g00495 154232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00495 296 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Car09g00495 296 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Car09g00495 296 Coils Coil 14 34 - -
Car09g00495 296 Pfam 14-3-3 protein 14 238 IPR023410 -
Car09g00495 296 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Car09g00495 296 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Car09g00495 296 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Car09g00495 296 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Car09g00495 296 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Car09g00495 296 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Car09g00495 Car12g00154 CCT
Car01g01232 Car09g00495 CCT
Car05g00457 Car09g00495 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car01g00402 Car-Chr1:2301824 Car09g00495 Car-Chr9:2767971 1.07E-160 dispersed
Car09g00495 Car-Chr9:2767971 Car12g00168 Car-Chr12:1031087 2.93E-131 dispersed
Car01g01232 Car-Chr1:11298726 Car09g00495 Car-Chr9:2767971 0 wgd
Car12g00154 Car-Chr12:881107 Car09g00495 Car-Chr9:2767971 2.48E-175 wgd
Car05g00457 Car-Chr5:2622520 Car09g00495 Car-Chr9:2767971 3.16E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00495 K06630 - csv:101210822 482.641