Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car09g00523 | ATGTTCCCAAAGCCCCACCACCAACCACCGTCCCAATCTCATCCTTTTCCACGCTCCTTCCCCGTCGCCGCAACTCCGCCGCCGCGCGGTTCTCCCTCCGCCGTCGATGAGGCTTCCGCGGCCGGCCCTTCGCCTCTCACTCACGCCATGTTCCCCAAAGAATCGGCATCCGCCGGCGACGGAGCTTCCATAGAAGTCGTCCGCCGCCCCAGAGGTCGTCCGCCAGGATCCAAGAACAAGCCGAAGCCGGCGGCCGTTGTCGTCGCCGGCCGCGACGCTGAGCCGGCGATGAGTCCTTATGTACTTGAAGTCCCCGGTGGTAGCGATATTGTTGAGGCTGTTGCCCGATATTGCCGCCGCCGAAACACAGGGCTGTGTGTTCTCAACGCTTACGGAACCATCGCTGACGTCACTCTCCGGCAGCCGCCTTCGTCTCCTGTGGCGACCGTCACTTTCCGTGGACGATTCGATATCCTTTCCGTCTGCGCTACTTTCGTTCCTCAAACGACGTCGTTTCCTATACCTAACGGATTCACCATCACGCTTGCGGGACCACAGGGCCAGATCTTCGGCGGCTTGGTCGCCGGATCTTTAATCAGCGCCGGAACCGTCTATGTAATCGCCGCCTCATTCAACAATCCGTCGTATCAGCGGCTGCCATCGGAGGACGAGGTCAAGAAATTAACCTTCAGCGACGTGGAAGAAGACCACTCTCCGATCTCCGGCAACAAAGACAGCGAAAGCACTGCCGCTACCGAAACCTGCGGTCTTCTCCCGATGTACAGCACTCACTCATCATCAGACGTAATATGGACGCCGGCCGCCAGACAACCGGGTCCGCCGCACCACCGCCAGTACTAA | 861 | 59.93 | MFPKPHHQPPSQSHPFPRSFPVAATPPPRGSPSAVDEASAAGPSPLTHAMFPKESASAGDGASIEVVRRPRGRPPGSKNKPKPAAVVVAGRDAEPAMSPYVLEVPGGSDIVEAVARYCRRRNTGLCVLNAYGTIADVTLRQPPSSPVATVTFRGRFDILSVCATFVPQTTSFPIPNGFTITLAGPQGQIFGGLVAGSLISAGTVYVIAASFNNPSYQRLPSEDEVKKLTFSDVEEDHSPISGNKDSESTAATETCGLLPMYSTHSSSDVIWTPAARQPGPPHHRQY | 286 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 2938508 | 2939368 | - | Carg03005-RA | Car09g00523 | 154260 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car09g00523 | 286 | MobiDBLite | consensus disorder prediction | 231 | 252 | - | - | |
| Car09g00523 | 286 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Car09g00523 | 286 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 99 | 213 | IPR005175 | - | |
| Car09g00523 | 286 | ProSiteProfiles | PPC domain profile profile. | 94 | 234 | IPR005175 | - | |
| Car09g00523 | 286 | MobiDBLite | consensus disorder prediction | 1 | 85 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Car05g00497 | Car-Chr5:2875366 | Car09g00523 | Car-Chr9:2938508 | 3.56E-90 | dispersed | |
| Car09g00523 | Car-Chr9:2938508 | Car15g00111 | Car-Chr15:651206 | 4.24E-44 | dispersed | |
| Car01g01260 | Car-Chr1:11456219 | Car09g00523 | Car-Chr9:2938508 | 3.03E-172 | wgd | |
| Car12g00177 | Car-Chr12:1096114 | Car09g00523 | Car-Chr9:2938508 | 4.89E-99 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car09g00523 | - | - | zju:107421268 | 308.531 |