Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00527 ATGCCGCATAGAACGACTTACTTTTTTCCCAGGCAGTTTCCTGATCGCGGATTTGATTCGGCGTCAACCTCCAAACACATTTCGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACTGAAAGCGACGCGAAACCGACCCCGCGGCCTGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTACCTGCTTTTTACGATTGGTTGGTGGATAAGAAAGCAACGCGATCGGCAACAGCTCACGTGAAAACTTGGCTTTCCAATTGCGACGAGGACCGCGAGCTCTTGCTTCCACCGCCTACCTCGGAGCCGGAGCATAATACAGCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGGGAGTAGCTTTGCCGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGATGTCAAGGATTCATCTGCGTCCAAAATATTGTCCTCGCACACGACGAGGCCGGAAGAGATTGAGGTTGGAGATGGTAACGAAAGCATAGCAAAGAAAGCTAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCCACGCTTCGTTCCCATGCTAGCCTCGCTGGCGATCCTGTGCTTCTGGAGGAAGGCAGGGTGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCTTACTCCGACAAAATATCAGACGGATTCTACAATATTTTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTTGATAGACGTGGGGACTCTCGCCTGAAAGAACTTGAAGACAAAGCACAAGAACTATATTGTGCTTCCGAGAGCACCTTAATGTTAGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGAACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTCCATTGGAAAGTGGTGAGCAAAAGATTGAGGGACTTCCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGTAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTATATAGGCTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCAGGAAATGTACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCTTCAATTCCTTCACCGCTCCACATTTCTCATTTAAAGGAGTTTCAAGAACCTTACGTGGAAAGTTATCTCAGTCATCAAACCGTTGAGTCGAAGCAAATCTGTGGGTTCCCTGAAAATCCTCTACCTTCAGGTCTTGGAGAGCACCAGGTGAAACGAGGAAGCACTTTGCATAGAAGTTCAGGGGCTGAAATTCATAAAATGGTTGATCAAGCTGGTACGGGTATGAGATCATCTCAGCTGCATGCGGAAACAAAAGTGAGCAAGGAGTGTGTGCTTAAGAATCAAATAATGTCATCCGCCGATGACTCAAACTGCGAGGTGTTGGGTTCTGTTGGTGGTGCAGCTTTACGTGAAAACAAAGTTGTCATTGAAGAAATCTACCAAGAAGAGAGTGTTGTTGCGGGGATTTCACTGAATGAAACTAGCATTAATCTTTCCAAATTAAGCTTGTCAACTCAAACTGATTCAAAAGAGGTTGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCAAAATATCTGACACTTGAACCATCACTTGCAATGGATTGGCTGGAAATTTCCTGGGACGAATTACATATAAAGGAGCGTGTTGGAGCTGGCTCATTTGGTACTGTGCACCGCGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACCATGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCGATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTCATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAGTATCTGCCCAGGGGTAGTCTATACCGTCTAATCCACCGGCCATCTTCTAGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTCAAGGTTTGTGATTTTGGGTTATCCAGATTCAAAGCAAACACTTTCATATCATCAAAATCTGTTGCTGGAACGCCCGAGTGGATGGCTCCAGAATTCCTTCGTGGAGAGCCTTCGAATGAGAAGTCCGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTTGGCCCGGCTCAGGTTGTGGGAGCTGTCGCTTTCCAGAACAGAAGGCTTTCTATCCCATCAAGTACTTCTCCATTGTTGGCTTCCCTAATTGAATCTTGCTGGGCAGACGATCCTGCTCAGCGTCCATCCTTCGCAAGCATAGTCGACTCCCTAAAGAAATTGCTTAAATCTCCACAGCAATTGATAGCAATGGGTGGAACGTGA 2778 46.33 MPHRTTYFFPRQFPDRGFDSASTSKHISDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSATAHVKTWLSNCDEDRELLLPPPTSEPEHNTASVKDRSVDRNFDRQVSLPRVSSGSSFAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHTTRPEEIEVGDGNESIAKKAKESYYLQLALAATLRSHASLAGDPVLLEEGRVEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRRGDSRLKELEDKAQELYCASESTLMLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLRDFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNVHGPDSSINGGFQSSIPSPLHISHLKEFQEPYVESYLSHQTVESKQICGFPENPLPSGLGEHQVKRGSTLHRSSGAEIHKMVDQAGTGMRSSQLHAETKVSKECVLKNQIMSSADDSNCEVLGSVGGAALRENKVVIEEIYQEESVVAGISLNETSINLSKLSLSTQTDSKEVEGRSQNCSASTYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTMQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSSELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRRLSIPSSTSPLLASLIESCWADDPAQRPSFASIVDSLKKLLKSPQQLIAMGGT 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 2961597 2969905 - Carg03009-RA Car09g00527 154264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00527 925 MobiDBLite consensus disorder prediction 113 134 - -
Car09g00527 925 MobiDBLite consensus disorder prediction 19 59 - -
Car09g00527 925 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524
Car09g00527 925 Pfam Protein tyrosine and serine/threonine kinase 655 909 IPR001245 GO:0004672|GO:0006468
Car09g00527 925 ProSiteProfiles Protein kinase domain profile. 655 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00527 925 MobiDBLite consensus disorder prediction 22 40 - -
Car09g00527 925 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Car09g00527 925 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car03g01062 Car-Chr3:8641205 Car09g00527 Car-Chr9:2961597 0 dispersed
Car06g00385 Car-Chr6:2099585 Car09g00527 Car-Chr9:2961597 0 dispersed
Car09g00527 Car-Chr9:2961597 Car14g00249 Car-Chr14:1156062 0 dispersed
Car20g00241 Car-Chr20:1413384 Car09g00527 Car-Chr9:2961597 7.16E-51 dispersed
Car04g01247 Car-Chr4:7220740 Car09g00527 Car-Chr9:2961597 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89087 PF07714 PK_Tyr_Ser-Thr 6.20E-65 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00527 - - csv:101204522 1692.94