Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00537 ATGGCTTCCGAACAGCAATCGACGGAGAGGCGTGAGCCAGTGGCCGTCCACTACCAACAAACTACTCCGGCAAGTTTGGTGAAGACGATTGGCTCGTGGCGCGCGAATTGTGTCGAAGATATTTGCTACCGCTACACGGCTCTCTTCGCCTTCTCCTCCTCCTCTGAGAGCCTCGTCGCGTCCTTCTTCTTCCTCTGTTATTTGCACTTTTCCCGCTTTTCTGATATGGACGCTTCAGCGGGTCGAAGTTTGTATCCTTCTCACCGTACTAAAACTATTCATCTGGTGAGGCATACCCAGGGATTTCATAATGTGGCAGGGGACATGAACGAATATCCACCTCTTGATTACTTTGACGCTCAAGTTACCTCTTTAGGATGGAAACAGGTTTGCAGTCTTCGGAAATATGTACAATCATGTGGTCTTTCTAAGAGAATTGAGTTGGTCATCACATCCCCCTTGTTCAGGACTATGCAAACAGCGGTTGGAGCATTTGGTGGTGAAGTTTGCCCGGATGGCATAAATGTTCCTCCATTAATGGTGGCGAATGCAGGAAATAGCAACTGCCCTGCAATTTCAAGTTTGAATTGCCCGCCATTTTTGGCAGTTGAGCTTTGTCGGGAACACTTGGGAGTTAATCCATGTGACAAGAGGCGAAGTATTGGGGGATGTCGGTCTCTTTTCCCTGCAATTGATTTTTCAATGGCAAGTTGCATTTGTTTTATTGAGCACGATGAAGATATCCTGTGGAATTCAGACATCAGAGAAACCAACGATGAAGTTGCAGATAGGGGACTTAAATTTCTTAAATGGCTTTGGACCCGGAAGGAGAAGGAGATTGCAATTGTCAGCCACTGTGGATTCTTATTTCATGTGTTGAGTGTGTTTGGGAACGACTGTCATCGTTCTATAGAGGATGAAATCTGCAAACAGTTTGCCAACTGTGAGCTTCGTTCGTTTGTTCTTGTTGATTGGAGCATGATCGGGTCAGAATCCTCACCGAGGACAACAACGACAAGGAGGACGACAACGACGACGACGACAACGACGGCCAATTGCCCGAGACGATTACCTACGAAAGGAATCGATCTTCCCAGTGATGTTGCAGCGGAAAAACAGCATCCAGGAAGGGAGTTACAAATGAAGATAAACGTGTCAAATCAATTTGCTTCTGCAACACGACTCTTTTCGCCTCCTCCTCCTCCTCCTCCTTTGAGTGCAGCCTCGTCGCGACCTTCTTCCTCCGTTGTTTGTTCTTTTTCCCGCTTTTCAGAAATGGACGCTTCAGGGGGGATAAGTTTGTATCCATCTCACCGTACTAAAACCATTCATCTGGTGAGGCATGCCCAGGGATTTCATAATGTGGCAGGAGAGAAGGACGCGAACGAATATCTATCTTTTGATTACTTTGATGCTCAACTTACATCTCTTGGATGGAAACAGGTTGCCAATCTGCGGAAACATGTACAATCATGTGGACTTGATAAGAGAATTGAGTTAGTCATTGTGTCCCCCTTGTTCAGGACTATCCAAACCGCGGTTGGAGCATTTGGTGGTGAAGGTTACTCGGATGGTATAAATGTTCCTCCGTTAATGGTATCAAATGCAGGAGATTGCAACCGCCCTGCAATTTCAAGTTTGAATTGCCCGCCATTTTTGGCAGTAGAGCTTTGTCGCGAACATTTGGGTGTTCACCCATGTGACAAGAGGCGAAGCATTAAAGAGTATCGGTCTCTTTTCCCTGCGATTGATTTTTCAATGGCAAGTTGCATTGTTTTGTCCATATTGCTGGATTATATTGAACATGATGAAGATAAACTGTGGAGCCCAGACACTAGAGAGACCAACGATGAAGTGGCAGATAGGGGATTGAAGTTTCTTAAATGGCTCTGGACCCGGAAGGAGAAGGAGATTGCAGTTGTCAGCCATAGTGGATTCTTATTTCATTCATTGAGTGCATTTGGAAATGACTGCCGTCCACTTGTAAAGGACGAAATCTGCAAACATTTTGCCAACTGTGAGCTTCGTTCCTTCGTTCTTGTTGATAGGAGCATGGTTGGGTCAGAATCCTCGACGACCAATTTCCCCGGCGGCTTACCGAAAGGGCTCGATCTTCCCAGTGATGTTGCAGCTGAAATGCAACCGGAGAAGAAGGGAGTTCCCAATGAAGATGTGGCTTGA 2181 46.22 MASEQQSTERREPVAVHYQQTTPASLVKTIGSWRANCVEDICYRYTALFAFSSSSESLVASFFFLCYLHFSRFSDMDASAGRSLYPSHRTKTIHLVRHTQGFHNVAGDMNEYPPLDYFDAQVTSLGWKQVCSLRKYVQSCGLSKRIELVITSPLFRTMQTAVGAFGGEVCPDGINVPPLMVANAGNSNCPAISSLNCPPFLAVELCREHLGVNPCDKRRSIGGCRSLFPAIDFSMASCICFIEHDEDILWNSDIRETNDEVADRGLKFLKWLWTRKEKEIAIVSHCGFLFHVLSVFGNDCHRSIEDEICKQFANCELRSFVLVDWSMIGSESSPRTTTTRRTTTTTTTTTANCPRRLPTKGIDLPSDVAAEKQHPGRELQMKINVSNQFASATRLFSPPPPPPPLSAASSRPSSSVVCSFSRFSEMDASGGISLYPSHRTKTIHLVRHAQGFHNVAGEKDANEYLSFDYFDAQLTSLGWKQVANLRKHVQSCGLDKRIELVIVSPLFRTIQTAVGAFGGEGYSDGINVPPLMVSNAGDCNRPAISSLNCPPFLAVELCREHLGVHPCDKRRSIKEYRSLFPAIDFSMASCIVLSILLDYIEHDEDKLWSPDTRETNDEVADRGLKFLKWLWTRKEKEIAVVSHSGFLFHSLSAFGNDCRPLVKDEICKHFANCELRSFVLVDRSMVGSESSTTNFPGGLPKGLDLPSDVAAEMQPEKKGVPNEDVA 726
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3027456 3038734 - Carg03019-RA Car09g00537 154274

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00537 726 MobiDBLite consensus disorder prediction 332 357 - -
Car09g00537 726 MobiDBLite consensus disorder prediction 689 726 - -
Car09g00537 726 MobiDBLite consensus disorder prediction 332 355 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00537 - - - csv:101202826 538.88
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car04g00391 Car-Chr4:2216630 Car09g00537 Car-Chr9:3027456 1.32E-100 dispersed
Car09g00537 Car-Chr9:3027456 Car16g00259 Car-Chr16:1629079 2.07E-107 dispersed
Car09g00536 Car-Chr9:3020523 Car09g00537 Car-Chr9:3027456 4.01E-07 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g558 . . . . Bpe02g00151 . . Bma01g02575 . . . Cma09g00605 . . . Cpe06g00466 . . . . . . . . . . . . . . . Cone4ag1277 Cone7ag0874 . . Lsi04g02298 Csa03g04517 Chy04g00186 . . . Bda11g00812 . . Bpe05g00448 . . Sed05g1536 . Cmo09g00593 . . . Car09g00537 . . Bhi09g02533 Tan01g3880 Cmetu04g2852 . Hepe01g2188 Mch11g0734 . Cla11g01447 Cam11g1500 Cec11g1537 Cco11g1533 Clacu11g1664 Cmu11g1480 Cre11g1900 . . . Cme04g00216
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000410 2 5 1 2 2 0 4 4 2 4 2 4 4 4 4 4 4 4 3 4 4 3 3 3 3 2 5 16 9 2 113
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Car09g00537 Car_Chr09 FPKM 7.312401 6.953068 7.047193 8.234255 18.932079 18.332382 19.691868 13.706703 14.191287 13.784679