Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00658 ATGGGCTTCTATACGGTAAAATGTCAATGGCTACTGATTCTTCACATTGTTCCGCTTTGCTTGATAATGAGCAGAAGCAGTGGTATCAGTTCTGATGGTGAGGCACTTTTGAGCTTCAGAGCAGCAATTCTTGATTCTGATGGTGTTCTTCTTCAATGGAAGCCAGAGGAACGCCATCCTTGTAAATGGAAAGGAGTAACGTGTGATCCAAAAACTAAGAGAGTGATATATCTGAGTCTTCCTTATCACAAACTTAGTGGATCGTTATCCCCTGAACTTGGAAAGCTTGATCAACTAAAAGTTTTAGCTCTTCATGACAACAACTTTTATGGGACAATTCCATCAGAATTAGGGAATTGCTCACAGTTGCAGGGAATAGATATTTCAAGTAACTCACTCGGTGGAAATATTCCCATCTCGTTTGGGAAGCTGAGCAAGCTTATAACTCTAAATGTTTCTGCCAATTTTCTGGTTGGATCGATACCAAATGTTGGCGTGCTAATCAACTTCTCCGAAAGTTCATTTCTTGGAAACCGTGGCTTGTGCGGGAAGCAAATCAATGTTATGTGCAAACATGACAAGGAGGGACCAGGAAGAAATGAATCGCCATTCTCAGTGCAAAGTCAAATTGAGAGGAAGAAGTACTCTGGCCGACTACTTATAAGTGCTTCCGCAACTGTGGGTGCTTTGCTGTTGGTTGCCCTAATGTGTTTCTGGGGTTGCTTTATGTATAAAAAGTTCGGCAAAAATGACAATAAAGGGCAAGTGCTCGATGTTTGTGGAGGTGCATCGGGTGTAATGTTTCACGGAGACTTGCCATACTCATCTAAAGATATTATTAAGAAATTTGAGACATTGAATGAAGAACACATAATAGGATGTGGGGGCTTTGGAACGGTGTACAAGCTTGCAATGGATGATGGCAATGTTTTTGCCTTGAAGAGAATTGTAAAATTGAACGAGGGCTTTGATCGATTTTTTGAGAGGGAGCTTGAAATCCTTGGAAGCATAAAACACAGGTTCCTTGTGAATTTGCGAGGATATTGCAAGTCTCCTACATCAAAGCTGTTAATTTATGATTTCCTTTCTGGAGGCAGCCTTGATGAGGCACTACACGGGGTCCGTACTGAAGCATCGGATCAACTATACTGGGACGCACGCTTAAATATCATCATGGGAGCTGCAAAGGGACTTGCCTATTTGCATCATGATTGCTCTCCGCGGATCATTCACCGAGACATAAAATCAAGCAACATTTTACTTGATGCTAATTTGGAGGCTCGAGTTTCTGATTTTGGACTTGCGAAGCTTTTAGAGGATGAAAAACCTCATATCACGACTATTGTTGCAGGAACATTTGGTTATCTGGCTCCTGAGTATATGCAAAGTGGTAGAGCTACTGAAAAGACTGATGTGTACAGTTTTGGAGTATTGGTACTTGAAGTGATGAGTGGCAAACGTCCCACAGATGCATCATTCATTGAGAAGGGGCTAAACATTGTTGGTTGGCTAAACTTTCTAGTCTCGGAGAATCGACAACGAGAAATAGTCGATCCACATTGCGAGGGCATGCAAACAGAGAGCCTCGATGCATTGCTTTCAGTTGCCATCCAATGTGTTTCGTCAAGTCCAGAGGATCGACCAACGATGCACAGGGTGGTCCAGATACTAGAATCTGAGGTTATGACTCCATGTCCAAGTGATTTCTATGACACAGATTAA 1722 42.22 MGFYTVKCQWLLILHIVPLCLIMSRSSGISSDGEALLSFRAAILDSDGVLLQWKPEERHPCKWKGVTCDPKTKRVIYLSLPYHKLSGSLSPELGKLDQLKVLALHDNNFYGTIPSELGNCSQLQGIDISSNSLGGNIPISFGKLSKLITLNVSANFLVGSIPNVGVLINFSESSFLGNRGLCGKQINVMCKHDKEGPGRNESPFSVQSQIERKKYSGRLLISASATVGALLLVALMCFWGCFMYKKFGKNDNKGQVLDVCGGASGVMFHGDLPYSSKDIIKKFETLNEEHIIGCGGFGTVYKLAMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRFLVNLRGYCKSPTSKLLIYDFLSGGSLDEALHGVRTEASDQLYWDARLNIIMGAAKGLAYLHHDCSPRIIHRDIKSSNILLDANLEARVSDFGLAKLLEDEKPHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVMSGKRPTDASFIEKGLNIVGWLNFLVSENRQREIVDPHCEGMQTESLDALLSVAIQCVSSSPEDRPTMHRVVQILESEVMTPCPSDFYDTD 573
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3862978 3869492 + Carg20065-RA Car09g00658 154395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00658 573 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Car09g00658 573 Pfam Protein kinase domain 288 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00658 573 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Car09g00658 573 ProSiteProfiles Protein kinase domain profile. 286 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car09g00658 573 ProSitePatterns Protein kinases ATP-binding region signature. 292 318 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00658 Car-Chr9:3862978 Car11g00135 Car-Chr11:764403 0 dispersed
Car04g00551 Car-Chr4:3104515 Car09g00658 Car-Chr9:3862978 0 transposed
Car09g00604 Car-Chr9:3429789 Car09g00658 Car-Chr9:3862978 2.76E-100 transposed
Car04g01115 Car-Chr4:6427648 Car09g00658 Car-Chr9:3862978 1.42E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
89093 PF00069 Pkinase 1.20E-44 CL0016 Car PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00658 - - cpep:111797176 1096.65