Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car09g00675 ATGGCACGGGTGTTAAAGAAGTATCCTGCCAACTTATCGGTCACGGCATATTCTTATTTATTTGGTGCTACATTGATGGTGATCACATCTTTCTTCATGACCAATGAATCCACAGACTGGAATTTGACGCAATCAGAGTTTTTCGCTGTCCTTTATGCTGGAATTTTTGCATCTGCCATCAATTATGGACTCTTGACATGGTGCAATAAGATATTGGGGCCTGCATTGGTCGCTCTTTACAACCCACTTCAACCTGCAGCATCTGCGCTGCTATCAAGAGTTTTCATAGGAAGCCCTATTTATCTCGGAAGTGTTTTGGGGGGCTCTCTTATAATTGCTGGTCTTTATTTGGTTACTTGGGCGTCACATAGGGAACGACAAACAACTCCAATTTTGCTTCCACAATCAACCAGGTCCTCTGAACCACTTATTCATAAAGATGCATTGACTAACAAGATTGCATATCAGATAGGACAGATTTTCTCAGGCTCTACATCTTCACCCAAATCTGTAGATTAG 519 41.81 MARVLKKYPANLSVTAYSYLFGATLMVITSFFMTNESTDWNLTQSEFFAVLYAGIFASAINYGLLTWCNKILGPALVALYNPLQPAASALLSRVFIGSPIYLGSVLGGSLIIAGLYLVTWASHRERQTTPILLPQSTRSSEPLIHKDALTNKIAYQIGQIFSGSTSSPKSVD 172
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3970433 3972261 + Carg20082-RA Car09g00675 154412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car09g00675 172 Pfam EamA-like transporter family 5 119 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Car09g00675 Car-Chr9:3970433 Car04g01954 Car-Chr4:13134365 3.25E-19 dispersed
Car09g00675 Car-Chr9:3970433 Car12g00412 Car-Chr12:2632584 1.21E-25 transposed
Car09g00675 Car-Chr9:3970433 Car05g00227 Car-Chr5:1189261 1.85E-25 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car09g00675 - - csv:101222886 320.087